Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0544 |
Symbol | |
ID | 6477448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 641603 |
End bp | 648781 |
Gene Length | 7179 bp |
Protein Length | 2392 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642729689 |
Product | YadA domain protein |
Protein accession | YP_002026932 |
Protein GI | 194364322 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.14824 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGGA TTTATCGCAA GGTCTGGAAC AAAGCATTGG GTCAGTTGGT GGTGGCCTCG GAACTGGCCT CCTCCGGCAG CAGCGGCGGG GTCGTCGACC AGCGCCGCGA TGCAACGCAG GCTGCGCCCG CACGGTTGGC GATGGCACTG GGCCTGGTAT TGGGATTGGG CATGAGCGGT ATCGCTGCGG CACAGTCGGT GCAGATCGGC GGCAGCGCCA CCTGCGTCGC ATTCAGCGGC AAGCTGCTCG AAAAGTGCCT GATCGAAGGC ACGGCTACGG CCAAGGGCAG CAACGCGGTG GCGATCGGCA GCAACAGCAG CGCCAGTGCT GCCAATAGCG TGGCGCTCGG CGCCGGCTCC AAGGCCACCC GTGCAAACAC CGTGTCCGTC GGTGACACCG GCAAGGAACG GCAGATCACC AATGTTGCTG CAGGCAGCCA GGCCACCGAT GCGGTGAACA AGGCGCAGCT CGATGCGCAG GCGCGTGCAA CGCAGGCCGC GCTTGCCGAT GTCGCCGCAG ACGGCAACCG TTATTTCAAG GCCGACGGCG CAGGCGATGA CAGCGACGCG GCGAAGATCG AAGGGCAGGG CGCCGTGGCG GCCGGTGCCG GCGCACAGTC GCTGGCCAAT GCGACCACCG CCATCGGTAC CCAGGCCATC GCTGCCGGCA TCGGCGCGAG TGCGTTCGGC CAAGGCGCAC TCGCGCTCGG CGATGCCAGC GTCGTGGTCG GGCAGAGTGC CGCGGCATTC GGTCTCGGCG ACACCGCGGT TGGCGCAAGC GCTACCGCAT CCAGCGAGAA CGGCGCGGCC ACCGCACTCG GCGCGCTGTC CGAAGCCACC GCTGATGGTG CGACGGCCGT CGGCGGCGGT GCCGTGGCGA TGGGCCCGGG CAGCACCGCA CTGGGCCGCG GCGCTACCGC CGCCAACGAA GCGTCGATCG CGGTTGGCGC GTTCAGCACC GCCGTCGGTG AATACAGCAC GGCGCTGGGC TCGAACTCCG CTGCGGTGGC TACCGGCAGC GTGGCGCTCG GCGCCGGCTC ACTGGCCGAT CGTGTCGATA CCGTGTCCGT CGGTGCCGCC GAATACGGCC TGACCCGCCA GATCACCAGC GTGGCTGCCG GTACGGAAGA TAACGATGCG GTCAACGTCG GCCAGTTGAA GGGCGTTGCC GCCGTGGCCG ATGCTACCGC CAAGCGCTTC CAGGCCACCG GCAGCAGTAA CAGCGATGCC GGTGCGCTGG CCGAGGGCGA CGACGCACTG GCTGCAGGCG AGGCCGCCAA CGCGATCGGC AACGGTGCTA CTGCAGTTGG CGCGGGTGCC GGCGCCGTCG CGCAGAACGC CACCGCCGTC GGCAACAACG CGCTGGCCTC GGGCCAGAAC AGTGCAGCGT TCGGCAACAA CGCACAGGCC AACGGCCCGG GCAGCGTTGC CGTGGGCGGT GCCGCGGTGG ACGCCAACGG CAACCCGCTG ATCACCAGCG GCGGCGTACC GGTGGAAACC GGCGCCACCA GCGCCGGCGT CGGTGGCACT GCCGTCGGTG CCAGCGCTGA AGCCAGCGGC TTTGCCGCGT CGTCCTACGG CGTGGGTGCC TATGCTGCCG GCGCACAGGC GTCGGCGTTC GGTGCGGTGG CCAATGCCAT CGGCGATTAC TCCACGGCAT TGGGTACGCA GAGCAATGCC ACCGGCACCA GCAGCGTCGC CATCGGCGGC CCGGCTGATC TGATCCCCGG TCTGGGCTTC TTCGTGCAGA CCCAGGCCAG TGGCGAAGCC GCGACCGCCG TCGGCGCGGG CGCCATTGCC AGTGGCGATC GCGCGGTGGC CAACGGCAGC CTGAGCGAGG CCTCCGGTGC CGAAGCCACT GCGGTCGGCT ACTTCGCCTA TGCACCTGGC GAGAACGCCA GTGCCCTCGG CGCTCAGACC TGGGCCAGTG GCGCACAGAG CACTGCGGTG GGTTACTACG CCACCGCACG TGGCGCCAAC AGCGTCGCGC TCGGCGCCAA CTCCGAAGCG GTGCGCGCCA ACAGCGTGGC GGTGGGCAGT GCCGGCAACG AACGGCAGAT CACCAGCGTT GCCGCCGGCA GCGAAGCCAC CGATGCGGTG AACAAGGCGC AGTTGGATGC GGTGGCCAAT ACCGCCGACA CCACCGCGCG GTTCTTCCAG GCGCAGCCGG AAGCTGGCAG CGATGCCGGC GCGCTGGCCG ATGGCGAGGG CGCCATCGCC GCCGGTTCGT CGAGCAATGC GATCGGTGCG GGTGCCATCG CGCATGGTGC GGCTGCATCC GCGATCGGCG ATGACAGTGT GGCGGTCGGC CGCAACAGCG CGGCCACCGG CAATGGCGGT GTCGCCATCG GTGGCCTCGG CCAGGCCTAC GATGAATTCA ACCAGCCGAT CATCGGTGCC GACGGCAAGG CACAACAGGT CGGCACCACC GCCGTTGCCG ATGCCACCGC AGTCGGCAGC GGTGCGCAGG CCACCGGAGC CACCAGCACT GCCTTCGGCA ATGCCGCCAA GGCCAGTGGT GACAACAGCT TCGCCGCCGG CGGCAAGTCA CGTGCCACCG GCAGCTATGC GGTTGCAGTC GGCGACAGCG CGTTCGCCAG CAGCGATGAC AGCACCGCCG TCGGTGGTTA CAGCTGGGCG ACCGCCAGTG GCGCAGCAGC ATTCGGTTCG GGTGCATGGG CCACCGCCAC CAACGCGTCG GCGTTCGGCA ACGCGGCGTG GGCCAGCGGC AGCGGCGCAA CGTCCATCGG TTACAACAGT TGGGCCAACG GTGCCAGCTC CACCGCCGTC GGTCGCGGGG CCTTCGGCTA TGGCGACAAC AGCGTGGCGT TGGGCTTCCA GGCGTTGGGC AACAGCATCA ACAGCATCGC CATCGGCACC AACACGGTGG CCGGTGGTGA GAGTGCGATC GCGCTCGGTG CCGGCAGCAA TGCCAGCGCC AGCAACACGG TCGCGCTGGG CGCTGGTTCG GTCGCCAACC GCGCGCGCAC GGTGTCGGTG GGCAGCGCTG GCAACGAACG CCAGGTCACC AACGTCGCCG CCGGCACCCA GGCCACCGAT GCGGTGAACA AGGCGCAGCT GGATGCGGTT GCGGCCACGG CCACAACCAC CAGTCGCTTC TTCCAGGCCA GCGGCAATGG CGATGACGTA GCCGGTGCGC TCGTGGACGG TGACAACGCA CTGGCCGCCG GTGATGCGGC CAATGCCATC GGCAATGGCG CCACTGCGCT GGGCAGCGGC GCCAATGCGT TGGCCAGCAA TGCGCAGGCG GTGGGCTTCA ATGCCCTGGC CAGCGCGGCC AATGCCAGCG CCGTCGGCGC CAACGCACAG GCCACCGGTG AGTACGCCAC CGCGCACGGT GCGGAAAGCG AGGCCAGCGG CGAGCAGAGC GCGGCGTTCG GTGCGGCCAG CATCGCCAGC GGTGCCGGCA GTACCGCTAC CGGCGTGCTG TCCGAAGCCT CTGGCGAAGA AGCCGTGGCT GTGGGTTACT TCAGCAATGC CAGCGGTGAC GCGGCAACCG CCGTGGGTAG CGAAAGCGTG GCCAGTGGCA CGGCGTCAGC GGCCTTCGGT ATCGGTGCCG AAGCCAGCGG CGGTTACAGC ACCGCCATCG GTGGCTACGC ACAGGCCTCG GCGTTCAACG CCACGGCGTT CGGCAACTTC GCCAATGCAT CCGGTTCCAA CAGTGTGGCA GTGGGTGGCG ATTCGGAAGC CTCCGGTGCC TACAGCACCG CCACCGGCCA GGGCAGCCTG GCCACCGGCA CCAACAGCGT CGCCGTTGGC GGCTCGCTGT TCGGCGTGCT GGCCACCGAG GCATCGGGCA ACTACTCCAC TGCGGTGGGT GGTGGCGCCT GGTCGGGGGG CATCAACAGC ACCGCACTGG GCAACGCCGC CGAATCGCGC GGTGCCAACA GCGTGGCGCT GGGTGCGGAC TCGATTGCCG ACCGCGACAA CACCGTGTCG GTGGGCGGCG GCGGCAATAC CCGCCAGATC ACCAACGTGG CCGATGGCAC CCAGGGCAAC GACGCGGTCA ACAAGAACCA GCTCGATGCG GTGGCCGCTG CGGCGGAAAA GACCAGCAAG CAGTTCCAGG CCAGTGGCAA TGCCGATGGC GAAACCGGGG CGCTGGTCGA GGGTGACAAC GCGCTGGCCG CAGGTGACGC CGCCAATGCC ATCGGCAACG GCGCCACCGC GCTGGGCAGT GGTGCCAATG CGCTCGCGGC CAACGCCACG GCGGTAGGCA TCGATGCGCT GGCCACCGGC AGCAACGCGG CTGCCCTGGG CAGCACGGCA CAGGCCACCG GCGAAGACAG CCTGGCGCTC GGCACCGGCG CCAGCGCCAG TGAACTGGGG GCAAGCGCGG TCGGCGCGCG CGCGCAGGCC AGCGGTGCAT ACAGCATGGC CACAGGTACA GAAGCCAATG CCAGCGGCAC CCAGGCATTG GCCAGCGGTT TCCGCAGCGC CGCGTCCGCC GATGGCACTA CCGCTGTCGG CGGCTACGCC GAAGCCAGCG GTCGCCTCGG CACCGCGTTG GGCTACGGCT CGGCGGCCAG TGGTGCCAAC ACCACCGCAG TCGGTTTCGG TGCCGCTGCG GCCGGAACCG GTGCCGTTGC CGTGGGTCAG TCCAGCGAGG CCAGTGGCGA GGAGAGCGTG GCCATCGGTG GCAGCACCTT CTTCGGCCTG ATCCCCTCGC GTGCCAGTGG CACCGGTGCC GCGGCATTCG GTGCGGGCGC GTGGGCCACC GAAGACTACG CCACGGCGAT CGGCTGGAAT TCGTGGGCGG CAGGCGGCAG CGCCACCGCA CTGGGTGCCA ATGCCACCGC CAATGGCAGC AACAGCGTCG CGCTCGGCGC CGGTTCCAAG GCCGACCGTG ACAACACGGT GGCCGTCGGC AAGGCGGGCG GTGAGCGCCA GGTAACCCAT GTCGCAGCAG GCAGCGAAGC CACCGATGCG GTGAACAAGG GCCAGCTGGA TGCAGTGGCC AGCGTCGCCG ACAAGACCAG CCGCCAGTTC CAGGCCAGCG GCAATGCCGA TGGCGAGGCC GGTGCACTGG TGGACGGTGA CAACGCACTG GCTGCCGGTA ATGCGGCCAA CGCCATCGGC AACGGCGCCA CCGCACTGGG CAGCGGTGCC AACGCGATGG CGGCCAATGC CACCGCGGTG GGCTTCGATG CGCTGGCCAC CGGCAACAAT GCCGCTGCAC TGGGTAACAC GGCGCAGGCC AGCGGTGTCG ACAGCGTCGC CCTCGGCAGT GGCGCCAGTG CCAGTGAGCT GGGTGCCAGC GCCACCGGTG CCGGCGCCCA GGCCAAGGGC GCCTACAGCA CCGCCAGCGG TGCGCAGGCC ACCGCCAGCG GCACGCAGTC GCAGGCCAAT GGTTTCCGCG CCAGCGCGTC GGCCGACGGC GCATCGGCCA TCGGTAGCTA CGCCGATGCC AGCGGCCGTC TTGGCACCGC AGTCGGTTAT GGCAGCAAGG CCACCGGCGC CAACGCGACG GCGGTTGGTG TCAGCGCCAA TGCCAGCGCT GCCGGCAGCG TCGCGCTGGG TGCTGGTTCG GTTGCCGACC GTGCCAACAC CGTGTCGGTC GGCAGTGCCA GCAGCGATCG CCAGATCACC CGTGTCGCCG CCGGTACCGA GCGTACCGAT GCGGTCAACC GTGGCCAGCT GGATGCCGTT GCCGCCACCG CAGACGGCAC GGCGCGCTAC GTCAAGGCCA CCGGCAGCGG CACGGCCAGC GCCAGCGGTA CCGACGCCGC AGCCATCGGT TCGGCAGCCA GCGCCAGTGG TGCGCGCAGC AACGCGCTGG GTGCCAATGC GCTGGCCATC GGCAACGGTG CATTGGCCCT GGGTACCAGC GCCGGTGCAA CGGGTGCCAA CTCGGTCGCG CTCGGCGCGG GTTCGCGAGC GCTCGATGCC AACGTGGTGT CGGTCGGTGG TGGCAACGGC ACCGATGGTC CGGCCACGCG CCGCATCGTC AATGTGGCCG ATGGCCGCAT CGCCGCCGGC AGCACCGATG CGATCACCGG TTCGCAGCTC AACGTCACCA ACCAGCGCGT GGGCGCGGTG GAAACCCGCG TCGGTGATTT CGATTCGCGC ATCACCACCG TTGAAACCAC GGCGGCCAGC GCGGTGGGCT ACGACGACGC CAGCCGTGAT CGCCTGACCC TGTCCGGCTT CCAGGGCACC ACCATCGACA ACGTCGGTGC AGGCAGCATT GCCGCCGGCA GCCGTCAGGC GATCAACGGC GGCCAGTTGT TCCAGTCGCT CAGTGATGCA GCCAGCTTCC TCGGTGGTGG TGCCAGCGTC GGTATGCAGG GCGTGTTCGT GGCGCCGAAC TATGTGATCC AGGGCGCCAC CTACAGCAAC GTCGGCGATG CATTGGGTGC GCTGGACCGC AAGGTCAGCG AGATCGACCG CCGCAGCGCC GGTGGCACGC GTGCCGGTGC GTCCAGCCTG CGCGCGATGA GCGCCTCGCT GGATGACACT TCGTTGGCCA GCACTGCCGA TGCCCCGGTG GCGGCGGATG CGGCAGCGGC CAGCACCGCA CGCGTGCAGG GCACGCCGAC GGCTGCCGCA GCAGGTGCCG GCATTCCGGT GGGTACGCCG GGAAGCGGCG CCAACTCGGT CACTGTGGGT GATGGCGCCG TGGCCAGCGG GGCTTCCTCG ACCGCGATCG GCCAGGGCGC TACCGCCACA GCAACCAACG CCATTGCATT GGGCCAGGGC TCGCTCGCCG ACCGTGCCAA TACGATCTCG GTGGGCAGCG AGGGCAACGA GCGCCAGGTC ACCAACGTGG CGGCCGGTAC CACGGCTACC GATGCGGTCA ACAAGGGCCA GCTTGATCGT GGCATGGCCA CGGCCAACAG CTACACCGAC AGCCGCGTCC AGGCCGTCAC CGACAGCTTC GATGTGTTCA AGGGCGAGAT CGACGGACGC CTGCGCCACA TGGATCGCCG CATCGACCGC CAGGGCGCGA TGAGCGCTGC AATGCTCAAC ATGGCCACCA GTGCTGCCGG TATCCGTACC CAGAACCGGG TCGGCGTCGG CATCGGTTTC CAGGGCGGCG AATCGGCGTT GTCGCTGGGC TACCAGCGTG CGATCAGCGA TCGCGCCACG GTCACCTTCG GCGGTGCCTT CAGCAGTGAC GACAGCTCGG TTGGCGTCGG TGCCGGCTTC GGCTGGTAA
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Protein sequence | MNRIYRKVWN KALGQLVVAS ELASSGSSGG VVDQRRDATQ AAPARLAMAL GLVLGLGMSG IAAAQSVQIG GSATCVAFSG KLLEKCLIEG TATAKGSNAV AIGSNSSASA ANSVALGAGS KATRANTVSV GDTGKERQIT NVAAGSQATD AVNKAQLDAQ ARATQAALAD VAADGNRYFK ADGAGDDSDA AKIEGQGAVA AGAGAQSLAN ATTAIGTQAI AAGIGASAFG QGALALGDAS VVVGQSAAAF GLGDTAVGAS ATASSENGAA TALGALSEAT ADGATAVGGG AVAMGPGSTA LGRGATAANE ASIAVGAFST AVGEYSTALG SNSAAVATGS VALGAGSLAD RVDTVSVGAA EYGLTRQITS VAAGTEDNDA VNVGQLKGVA AVADATAKRF QATGSSNSDA GALAEGDDAL AAGEAANAIG NGATAVGAGA GAVAQNATAV GNNALASGQN SAAFGNNAQA NGPGSVAVGG AAVDANGNPL ITSGGVPVET GATSAGVGGT AVGASAEASG FAASSYGVGA YAAGAQASAF GAVANAIGDY STALGTQSNA TGTSSVAIGG PADLIPGLGF FVQTQASGEA ATAVGAGAIA SGDRAVANGS LSEASGAEAT AVGYFAYAPG ENASALGAQT WASGAQSTAV GYYATARGAN SVALGANSEA VRANSVAVGS AGNERQITSV AAGSEATDAV NKAQLDAVAN TADTTARFFQ AQPEAGSDAG ALADGEGAIA AGSSSNAIGA GAIAHGAAAS AIGDDSVAVG RNSAATGNGG VAIGGLGQAY DEFNQPIIGA DGKAQQVGTT AVADATAVGS GAQATGATST AFGNAAKASG DNSFAAGGKS RATGSYAVAV GDSAFASSDD STAVGGYSWA TASGAAAFGS GAWATATNAS AFGNAAWASG SGATSIGYNS WANGASSTAV GRGAFGYGDN SVALGFQALG NSINSIAIGT NTVAGGESAI ALGAGSNASA SNTVALGAGS VANRARTVSV GSAGNERQVT NVAAGTQATD AVNKAQLDAV AATATTTSRF FQASGNGDDV AGALVDGDNA LAAGDAANAI GNGATALGSG ANALASNAQA VGFNALASAA NASAVGANAQ ATGEYATAHG AESEASGEQS AAFGAASIAS GAGSTATGVL SEASGEEAVA VGYFSNASGD AATAVGSESV ASGTASAAFG IGAEASGGYS TAIGGYAQAS AFNATAFGNF ANASGSNSVA VGGDSEASGA YSTATGQGSL ATGTNSVAVG GSLFGVLATE ASGNYSTAVG GGAWSGGINS TALGNAAESR GANSVALGAD SIADRDNTVS VGGGGNTRQI TNVADGTQGN DAVNKNQLDA VAAAAEKTSK QFQASGNADG ETGALVEGDN ALAAGDAANA IGNGATALGS GANALAANAT AVGIDALATG SNAAALGSTA QATGEDSLAL GTGASASELG ASAVGARAQA SGAYSMATGT EANASGTQAL ASGFRSAASA DGTTAVGGYA EASGRLGTAL GYGSAASGAN TTAVGFGAAA AGTGAVAVGQ SSEASGEESV AIGGSTFFGL IPSRASGTGA AAFGAGAWAT EDYATAIGWN SWAAGGSATA LGANATANGS NSVALGAGSK ADRDNTVAVG KAGGERQVTH VAAGSEATDA VNKGQLDAVA SVADKTSRQF QASGNADGEA GALVDGDNAL AAGNAANAIG NGATALGSGA NAMAANATAV GFDALATGNN AAALGNTAQA SGVDSVALGS GASASELGAS ATGAGAQAKG AYSTASGAQA TASGTQSQAN GFRASASADG ASAIGSYADA SGRLGTAVGY GSKATGANAT AVGVSANASA AGSVALGAGS VADRANTVSV GSASSDRQIT RVAAGTERTD AVNRGQLDAV AATADGTARY VKATGSGTAS ASGTDAAAIG SAASASGARS NALGANALAI GNGALALGTS AGATGANSVA LGAGSRALDA NVVSVGGGNG TDGPATRRIV NVADGRIAAG STDAITGSQL NVTNQRVGAV ETRVGDFDSR ITTVETTAAS AVGYDDASRD RLTLSGFQGT TIDNVGAGSI AAGSRQAING GQLFQSLSDA ASFLGGGASV GMQGVFVAPN YVIQGATYSN VGDALGALDR KVSEIDRRSA GGTRAGASSL RAMSASLDDT SLASTADAPV AADAAAASTA RVQGTPTAAA AGAGIPVGTP GSGANSVTVG DGAVASGASS TAIGQGATAT ATNAIALGQG SLADRANTIS VGSEGNERQV TNVAAGTTAT DAVNKGQLDR GMATANSYTD SRVQAVTDSF DVFKGEIDGR LRHMDRRIDR QGAMSAAMLN MATSAAGIRT QNRVGVGIGF QGGESALSLG YQRAISDRAT VTFGGAFSSD DSSVGVGAGF GW
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