| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2495 |
|---|
| Symbol | |
|---|
| ID | 6463646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2584009 |
|---|
| End bp | 2585250 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642728673 |
|---|
| Product | peptidase U32 |
|---|
| Protein accession | YP_002019295 |
|---|
| Protein GI | 194337501 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAA AAAAGGTTGA ACTGATTGCG CCTGCCGGCG ACATGACCGG ATTGCTTACT
GCACTGAAGG CGGGAGCGGA TGCGGTTTAC TTCGGAGCCG AGGGCTATAA CATGCGTGCA
GGGAGCAGCA ATTTCACTCC TGCTGATTTT CCTGCCATCA AGGCTCTCTG CAAGGAATAC
AATGCGAAAA AATACCTCGC ACTGAATACC ATTGTCTATG ACAATGAACT GAAAAAGATG
ACGCAGACCA TCGCCGTAGC AAAAAGGGTG GGAATTGACG CCATCATTTG CTCGGACATG
GCGGTAATTG AGGCCTGCAG GAAAGCTGGA ATACCCTTTC ATATCTCGAC ACAGGCATCG
GTCAGCAGTT ACAGCGCTGT AAAATTCTAT GCCGCTCTCG GGGCAAAAAT GATTGTACTC
GCAAGAGAGC TTACCATTGA ACAGGTACGC CATATTACGA ATAGCATAAA GGCAGACGGG
CTGGATGTGC AGATTGAATG CTTTGTTCAC GGCGCCATGT GCGTTGCCGT ATCGGGGCGT
TGTTTCATGT CACAGGATCT GTTCGGCCGC TCGGCAAACC GTGGTCAGTG TGTGCAGCCG
TGCCGTCGGG AGTATCTCAT TACCGATCCG GAAGAGAAGG AGGAACTTGT GCTTGGAACA
GATTATGTGA TGAGTCCAAA GGATCTCTGT ACGGTGGAAT TTATTGATGT GCTGATGGAT
GCGGGAATAA CCGCCTTCAA AATCGAAGGG AGAAGCCGCA GCCCGGAATA TGTGCATACG
GCCACAACAG CATACCGCAG CTCGATCGAC TTCTGCACCA CCCGCCGCAA CGACCCGGAA
TTCAGAAATG AGTACAGCAA ACTGACAACA CAGCTCAAGG AGGAGCTTGC AACCGTTTAC
AACCGTGGAT TTTCGAAAGG CTTTTATTTT GGCAAGCCTC TTGAAGAGTG GGTGAGGGAG
TACGGTTCAC TGGCCAAAGA GAAAAAGAGC TATATCGGTG AGGTACAGAA ATATTATCCA
AAAGTGGAGG TTGCCGAGAT CCATATCCTG GCTCGCGGCC TTAAAAGCGG CGACAAACTC
TCCATCCAGG GGGCAAAAAC CGGTGTCGTC ACCGCCTTTG CCGACTCCTT TTTAACCAAT
GACCGACCCG ATCTCGATGC CATCAAAGGC GACAATGTTA CCTTGCGGTG TGCCAAGGTA
AGGAAACATG ACAAGGTTTA TCTTCTTGAA AAAAGAGCGT AA
|
|---|
| Protein sequence | MLEKKVELIA PAGDMTGLLT ALKAGADAVY FGAEGYNMRA GSSNFTPADF PAIKALCKEY
NAKKYLALNT IVYDNELKKM TQTIAVAKRV GIDAIICSDM AVIEACRKAG IPFHISTQAS
VSSYSAVKFY AALGAKMIVL ARELTIEQVR HITNSIKADG LDVQIECFVH GAMCVAVSGR
CFMSQDLFGR SANRGQCVQP CRREYLITDP EEKEELVLGT DYVMSPKDLC TVEFIDVLMD
AGITAFKIEG RSRSPEYVHT ATTAYRSSID FCTTRRNDPE FRNEYSKLTT QLKEELATVY
NRGFSKGFYF GKPLEEWVRE YGSLAKEKKS YIGEVQKYYP KVEVAEIHIL ARGLKSGDKL
SIQGAKTGVV TAFADSFLTN DRPDLDAIKG DNVTLRCAKV RKHDKVYLLE KRA
|
|---|
| |