Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2269 |
Symbol | |
ID | 6462227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2352146 |
End bp | 2353342 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642728457 |
Product | geranylgeranyl reductase |
Protein accession | YP_002019081 |
Protein GI | 194337287 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCCT ATGATGTTGT TATATCAGGC GCTGGTCCTG CGGGATGTTC GTCTGCGTTG TTTCTTGCCC AAAAAGGGTG CCGTGTTTTG CTGCTCGACA AGGCGACGTT TCCAAGAGAG AAGGTTTGCG GAGACGGTAT CACTGCAGCT TCTTCGACTC TTCTTGAAGA GATGGGCGTT ATGGATCGTC TTCGCCTTCG GCTGGGCCCA TTGATGGTAT GTAAAGGCGT TACCATCTTT TCTCCTGCCG GGACTGTTTT GCAGGGGAGA ATCTTGCAAA CCGGGAGTTT GACTGGTGCG ACCTATGTTA TTCCAAGAAA AGAATTTGAT GACTGCCTTA TTGCCTGCGT GAAAGAGCAC TCTTCGATCA CCCTTCTCGA AAATACGACC GTTACCGATA TCATCATGGA AGGTGACAGA GCGAGAGGTG TAAGAAGTTC CGGAGGTGAC TGGTTCGGTC GTGTTGTCAT TGCTGCCGAC GGGGCCTATT CTCCAATAGC TTCCCGGTTG CATCTGGCAA ACAAGGAGAA AAAGCATCAG GGGTTTGCCA TTCGTGCCTA TTACTCAAAG GTTGAGGGGT TGACGGATTC CATAGAACTC CATTACGACA AGTCCATGGT TCCTGGTTAT GGCTGGATAT TTCCTTTAGG TAATCAGAGA GCCAATGTCG GGGTGGGCCT TATGACCCGT TTCAAAGATC AGCGCGGTCT CAAGCAGTTG TTTGAGCGGT TTGTTGGTGA GAATGCGTTT GCATCGGCAA AGTTGAAACA TGCTGTTATG GAGCCGGGAA CACTCAAAGG GTGGCCTCTT CCTTTTGGCT CTTTTCAGGG AAAAAGAGGT CGTGGTAATG TGCTGCTCAC CGGGGATGCT GGCAGTTTTG TAGATCCTCT GAATGGTGAA GGGATATATT ATGCGTTGAA AAGTGGCCGG TATGCTGCAG AGGCCGCTGC AAGGGCTCTG GATGAAGAGG AAATTCGGGC TTCAATGTAT TACGAGAAGC TCTGGCGAAA AGAGTTTTCA TTTCACGAGT TTACTCTTGG GTATGCTCTT CAGCCTTTGC TGAATAATGA GTTTCTACTG GAGTCGCTCA TGAGGTTTGC GGCTAAAAAA CAAACACGGG CAAACTTGTT AGCCGGGGTC ATCGGTCATA ATTTTAAAAA ACGTGATTTG CTCAAATTAA TACCTCCTTT TTCGTGA
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Protein sequence | MKSYDVVISG AGPAGCSSAL FLAQKGCRVL LLDKATFPRE KVCGDGITAA SSTLLEEMGV MDRLRLRLGP LMVCKGVTIF SPAGTVLQGR ILQTGSLTGA TYVIPRKEFD DCLIACVKEH SSITLLENTT VTDIIMEGDR ARGVRSSGGD WFGRVVIAAD GAYSPIASRL HLANKEKKHQ GFAIRAYYSK VEGLTDSIEL HYDKSMVPGY GWIFPLGNQR ANVGVGLMTR FKDQRGLKQL FERFVGENAF ASAKLKHAVM EPGTLKGWPL PFGSFQGKRG RGNVLLTGDA GSFVDPLNGE GIYYALKSGR YAAEAAARAL DEEEIRASMY YEKLWRKEFS FHEFTLGYAL QPLLNNEFLL ESLMRFAAKK QTRANLLAGV IGHNFKKRDL LKLIPPFS
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