| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1970 |
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| Symbol | |
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| ID | 6463027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2055111 |
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| End bp | 2055509 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642728171 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_002018801 |
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| Protein GI | 194337007 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGTA AATATCTCTT TTTTTCAGTG TGCCTGGCTT TGGGAAGCAT TCTGGCAGAC
ACTCATCTGC TTTATAGTAT GGGGACAGAA CATGCCGATA AGCTGTCGGA ATTACGGTAT
AAGTCCGGGC ATGGTGACGC AGAGGCTCAA TACAAACTCG GAGTGCTGTA TGCTTCAGGA
AAAGGTCTTA CCCAGGACTA TTCCCAGGCG ATAAAGTGGT GGCATCTTGC TGCAGATCAG
GGTAATGCAG AAGCCCAATA CAGTCTGGGA GTAATGTATG GCACCGGCAA TGGTGTGAAA
CAGGACGATT CCGAGTCGGA TAACTGGTTG CAGTTATCCG CAAAGCAGGG GTATGCACCA
GCACAAAAGT TGTTGAATAA ATTGAAGGAG AAACAATAA
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| Protein sequence | MKSKYLFFSV CLALGSILAD THLLYSMGTE HADKLSELRY KSGHGDAEAQ YKLGVLYASG
KGLTQDYSQA IKWWHLAADQ GNAEAQYSLG VMYGTGNGVK QDDSESDNWL QLSAKQGYAP
AQKLLNKLKE KQ
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