| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1779 |
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| Symbol | tpiA |
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| ID | 6462247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 1879943 |
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| End bp | 1880698 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727991 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_002018628 |
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| Protein GI | 194336834 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.906694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCAGAA AAATTGTAGT TGGGAACTGG AAAATGAACA ACAGTGTTGC CGAATCGGTG
CAGCTTGCAA CGGATGTGCT TGCAGCACTT GGTGAGGGTT TTTCGGGCTG TGAGGTTGGT
ATAGCGCCGA CCTATCTTGC CCTTGATGCT ACAGAAAAGG TGATTGCAGA GAGTGAAGTT
CAGCTTGTTG CCCAGAACTG CCATTATGAA AATGATGGCG CATTTACCGG AGAGGTATCG
GCCAGAATGA TCCTTGCTGT TGGCTGTTCT TCCGTTATTA TCGGCCATTC CGAGCGTCGT
CAGTATTTCG GCGAAACAAA TGCTACGGTA AATCTCAGGA TAAAAAAGGC CTTGTCGGAA
GGGCTGAACG TTATCCTCTG TGTTGGTGAA ACACTTGCAG AACGCGAATC AGGCGTCATG
GAAACTGTTA TCTCTTCACA GGTCAGGGAA GGGCTCGACG GTATCATCGA TATCAGTGCC
ATTGTCATTG CCTATGAGCC AGTCTGGGCT ATTGGTACCG GAAAAACAGC AAGTTCAGCA
CAGGCTGAAG AGGTGCATCT CTTTATTCGC ACACTTGTCA CTGGACTTTA TGGTCAGACA
GCCTCAGAGA AAGTTCGTAT CCAGTATGGT GGAAGTGTCA AGCCTTCAAA TGCGGCCGAA
CTCTTTGCCA TGCCGAACAT CGATGGTGGT TTGATTGGAG GAGCGAGCCT CAATGCAGAT
GATTTTGCCG CAATCGTTAA AGCTGCTTCC GTTTAA
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| Protein sequence | MRRKIVVGNW KMNNSVAESV QLATDVLAAL GEGFSGCEVG IAPTYLALDA TEKVIAESEV
QLVAQNCHYE NDGAFTGEVS ARMILAVGCS SVIIGHSERR QYFGETNATV NLRIKKALSE
GLNVILCVGE TLAERESGVM ETVISSQVRE GLDGIIDISA IVIAYEPVWA IGTGKTASSA
QAEEVHLFIR TLVTGLYGQT ASEKVRIQYG GSVKPSNAAE LFAMPNIDGG LIGGASLNAD
DFAAIVKAAS V
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