Gene Ppha_1757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1757 
Symbol 
ID6462904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1856994 
End bp1858289 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content53% 
IMG OID642727969 
ProductMiaB-like tRNA modifying enzyme YliG 
Protein accessionYP_002018606 
Protein GI194336812 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125
[TIGR00089] RNA modification enzyme, MiaB family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACGC ATAAACTCTT TCTTCTGAGC CTTGGCTGCT CTAAAAACAC GGTTGATTCC 
GAACGGCTGA TGGCACAGGC TGAAGCCTCG GGGATTATCT TTACCGAGAC CGCCGATGAA
GCCGACACAA TCCTCATCAA CACCTGCGGT TTTATTGAAG ATGCCAAGGA GGAGTCGATC
ACTGAAATCC TTGCCGCTAT CGATAAAAAA AGTGAGGGAA CAATTCAGCG GCTCTATGTG
ATGGGCTGCC TCACCGAACT CTACCGCAAT GAACTCAAGG AAGAGATGGC AGAGGTGGAT
GGATTTTTTG GTACCCGTGA ACTGCCCGAA ATCCTTGCTG CTCTCGGTGC TGCCTACCAC
GAAGAGCTCT ATGACCATCG TTCACTCCTC ACCCCTCCCC ACTACACCTA CCTCAAGATT
GCCGAAGGGT GCAACCGCTC CTGCTCGTTC TGCTCTATTC CAAAAATCAG GGGACGCTAC
CGCAGCCAGC CGGTCGAGCA GCTCCTGCGT GAAGCTATCC TGCTGAAAAA CTCCGGAGTT
AAGGAATTGA ACATAATCTC GCAGGATATC AGCATGTTCG GCTACGACAC GATGGGCAAA
TCGATGCTGA ACGACCTCGT GCTCCGCCTC TCCGATATGG CATTCGACTG GATCCGGCTG
CTCTACGCCT ACCCGGTAAA TTTTCCGCTT GAAGTCATTG AAACCATGCG CGAGCGGGAG
AACATCTGCA ACTATCTCGA CATTCCCCTG CAGCATTGCA ATGACCGTAT CCTGAAATCA
ATGAACCGAG GGATCAACAA ACAGGAGAGC ATCCAGCTCA TCGAAACCGT ACGGGAGAAG
AACCCCGATA TCCGCCTGCG TACCACCATG ATCGCTGGCT ATCCCGGTGA AACCCGGGAA
GAGTTTGATG AACTGCTGGA ATTTGTTGAA GCCAACCGGT TCGACAGGCT TGGCTGCTTC
CCTTACTGCC ACGAGGAATA TGCCCCCTCC TTCGCCCTTG AAGACAACGT CAGCGCTGAA
GAGAAACAGG ATCGGGTGGC GGAGCTCATG GAGCTGCAGG AGAGCGTTTC GCAGGATAAA
AACCGGGATT TTGAAGGAAA AGAGATCACC GTGCTCATTG ATCAGGTGGA AGAAGGTATG
GCCTTTGGCC GTACGGAGTA CGATGCTCCC GAAGTGGACA ACGAATGCAT GCTTGAAACC
GGTGATTTCC AGGTCGAGCC CGGCATGTTC TGCCACGCGC GAATTACCGA TTCAACACCG
TTTGATCTGG TGGGTGAGGT GATCGGGCTC GTGTAA
 
Protein sequence
MTTHKLFLLS LGCSKNTVDS ERLMAQAEAS GIIFTETADE ADTILINTCG FIEDAKEESI 
TEILAAIDKK SEGTIQRLYV MGCLTELYRN ELKEEMAEVD GFFGTRELPE ILAALGAAYH
EELYDHRSLL TPPHYTYLKI AEGCNRSCSF CSIPKIRGRY RSQPVEQLLR EAILLKNSGV
KELNIISQDI SMFGYDTMGK SMLNDLVLRL SDMAFDWIRL LYAYPVNFPL EVIETMRERE
NICNYLDIPL QHCNDRILKS MNRGINKQES IQLIETVREK NPDIRLRTTM IAGYPGETRE
EFDELLEFVE ANRFDRLGCF PYCHEEYAPS FALEDNVSAE EKQDRVAELM ELQESVSQDK
NRDFEGKEIT VLIDQVEEGM AFGRTEYDAP EVDNECMLET GDFQVEPGMF CHARITDSTP
FDLVGEVIGL V