Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1617 |
Symbol | |
ID | 6463241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1705411 |
End bp | 1706820 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642727834 |
Product | Radical SAM domain protein |
Protein accession | YP_002018472 |
Protein GI | 194336678 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0136432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATCA TACAATCAGA AACTCTCGTC TCGCCGCTCG ACACCGCCTC AAATAGTTCC GAGGAACTTC TCCACCAGCT TGCTGCACAG CAAAAATCAC GCAAGAAATG GCTTCTCATC CAGCCGGTAA GCAACACCAG CATGATGGTC GATTCCGGTA CGGTCAGTAT GCCGTTAAAC CTGATTATGG TTGCCACCAT CGTCGGAACG CTCTTTGACG TCACCTTTAT CGATGAGCGG CTTGGAGACA AGATTCCTGA AGATTTTTCC GGATTTGATG TCATAGCCAT CACCTCGCGA ACACTCAACG CATCACAAGC CTACCGGATC GGCGACAGGG CATTAAAACA GGGCAAAACC GTTATCCTCG GCGGAGTCCA TCCCACCATG CTGAACGAAG AGGCCTCCCT GCACTGCACC AGCGTGGTCT ACGGTGAAAT TGAGTCCATC TGGACAGAAC TTGCCACTGA TGTGCTGAAA GGCAAAATGC AGCAGGTATA CCGGGCAAAG GAGCTAAAGT CGATGAGCGA CATGCACCGC CCCGATTTCA GCTATGCCCT TTCATCAAAA AGCTCGAAAA AATACAGCTC ACGCATTCCC CTGCTTGCAA CAAAGGGTTG CCCTGTCGGG TGCAACTTCT GCACAACACC AACCATTTAC GGCAAGAACT ACCGCTACCG CGAGCTTGAC CTGGTACTCG ATGAGATGCG TTACCATCAG GAGCGGGTTG GGAAGAAAAA TGTCAATTTT TCCTTCATGG ACGACAACAT CAGTTTCCGT CCCAAGTATT TCATGACCCT GCTTGAAGAG ATGGCCAAGC TTGGCGTACA CTGGAACGCC AATATCTCCA TGAACTTTCT CGACAAACCC GAAGTTGCCG AACTTGCTGG CCGCTCCGGC TGCGATCTGC TCAGCATCGG GTTTGAATCG CTCAATCCGG AAACCCTGAA AACCCTCCAC AAGGGCTCCA ACCGTCTCAG CAACTATGAA CAGGTTGTAA GCAATCTCCA TAAAAACAAA ATTGCCATCC AGGGATACTT CATGTTCGGT TTCGACAACG ACACCGAAGA GAGCTTCCAG CTCACCTACG ACTTCATCAT GAAAAACAAG ATCGAGTTTC CGGTATTTTC ACTGGTCACC CCCTTCCCCG GAACACCCTA TTTCGATGAA ATGAAGCCCC GCATCCGCCA TTTCGACTGG GACAAGTACG ACACCTACCA CTACATGTTC GAGCCAACCA ACATGACTGG CGAAAAAATG CTCTCAAACT TTGTCAAGCT CCAGAAAGAG GTCTACAAGG GAGGCGCCAT CATGCAGCGC ATGGCAGGCA AACCGCTCAA CTGGGTCTGG CTCGCCAACT ACGCTATGAA CCGCTTCACC AGCAAGCTGA CGCCGGAATA TTATTACTGA
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Protein sequence | MQIIQSETLV SPLDTASNSS EELLHQLAAQ QKSRKKWLLI QPVSNTSMMV DSGTVSMPLN LIMVATIVGT LFDVTFIDER LGDKIPEDFS GFDVIAITSR TLNASQAYRI GDRALKQGKT VILGGVHPTM LNEEASLHCT SVVYGEIESI WTELATDVLK GKMQQVYRAK ELKSMSDMHR PDFSYALSSK SSKKYSSRIP LLATKGCPVG CNFCTTPTIY GKNYRYRELD LVLDEMRYHQ ERVGKKNVNF SFMDDNISFR PKYFMTLLEE MAKLGVHWNA NISMNFLDKP EVAELAGRSG CDLLSIGFES LNPETLKTLH KGSNRLSNYE QVVSNLHKNK IAIQGYFMFG FDNDTEESFQ LTYDFIMKNK IEFPVFSLVT PFPGTPYFDE MKPRIRHFDW DKYDTYHYMF EPTNMTGEKM LSNFVKLQKE VYKGGAIMQR MAGKPLNWVW LANYAMNRFT SKLTPEYYY
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