Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1094 |
Symbol | |
ID | 6462828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1126413 |
End bp | 1127726 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642727340 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002017990 |
Protein GI | 194336196 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.929439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAC CATCAACCCT CCATAAAATG GGGCCGATTA CTCTGGCGCC GTCGGTGCTG CCCCGCCACG CTCTGACCTA TCTCTATGCG GCTTTCTTTT CTATCGGGCT GGTCACCTTT GTCTCGATCG GTCAGGCTTA TATCCTCAAC GAGCATCTGA AAATTCCCAC TTCGCAGCAG GGAACCATCA GCGGCAATCT GGTTTTCTGG ACGGAAGTTG TCACGCTGCT CTTTTTTGTG CCTGCCGGGG TTCTGATGGA TCGTATCGGG CGAAAACCGG TCTACAGCGC CGGTTTTTTT CTGCTTGCAG TGGCTTATGC GCTCTATCCG CTTTCACGAT CCGTTTTTGA TTTAACTCTC TACAGGATGA TTTATGCACT CGGTATTGTT GCGGTGACCG GTGCGCTCTC GACGGTGATG ATCGACTATC CTGCTGAACG GTCGCGGGGA AAACTGATTG CCATAACCGG ATTTCTTAAT GGTCTTGGTA TTGTGGTGCT GAACAGCTTT TTCGGCGGCT TGCCGATGCA GCTTGTTGCG AAGGGGTTCA GCGGCAGTGA TGCCGGGCTC TATACGCATC TTGCCATTGC CGGAGTTGCG CTGGTTTCGG CAGTGGTTGT TGCCTTTGGT CTGAAGGGCG GCACGGAGGT GAGCAAAAAG GATCGTCCTG CTCTTCGCTC TCTTGTTACC AGCGGCATCC GGTGTGCCAA AAATCCGCGC ATCCTTCTCT CTTACGCTGC CGCCTTTGTT GCGAGGGGTG ATCAATCCAT TATCGGCACC TTTCTGCCTT TGTGGGGAAC GACTGCTGGA ATAGCCATGG GTATGGCGCC TGCCGAAGCG GTCAAAAAGG GAATGATGAT TTTTATTATC TCACAGGCTG CGGCACTGCT CTGGGCGCCG GTTATCGGTC CACTTATCGA CCGATGGAAC CGGGTTACTG CACTGACAAT CTGCATGGGA CTGGCAAGCA TCGGCTATCT TTCGCTGGGG CTGATCAGCA ATCCGCATGA ACCTGCTTCA ATTGTCAATT TCGTGCTCCT CGGCATAGGG CAAATCAGCG CCTTTCTCGG TTCGCAGTCT CTCATCGGAC AGGAGGCGCC AAAGGCAGAG CGGGGGTCGG TTATCGGTAT GTTCAATATC AGCGGCGCCG TGGGAATCCT TATCATCACG ACACTCGGAG GACGATTGTT TGACTCCATG AGCCCGAAGG CACCGTTTAT TGTTGTCGGT GCCATCAACT CTCTGGTCAT GGTTGCGGGT ATCTACGTCC GTATCAAGTT TCCGGGCACA GTACACCTGA ACGAACAGCA CTGA
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Protein sequence | MNEPSTLHKM GPITLAPSVL PRHALTYLYA AFFSIGLVTF VSIGQAYILN EHLKIPTSQQ GTISGNLVFW TEVVTLLFFV PAGVLMDRIG RKPVYSAGFF LLAVAYALYP LSRSVFDLTL YRMIYALGIV AVTGALSTVM IDYPAERSRG KLIAITGFLN GLGIVVLNSF FGGLPMQLVA KGFSGSDAGL YTHLAIAGVA LVSAVVVAFG LKGGTEVSKK DRPALRSLVT SGIRCAKNPR ILLSYAAAFV ARGDQSIIGT FLPLWGTTAG IAMGMAPAEA VKKGMMIFII SQAAALLWAP VIGPLIDRWN RVTALTICMG LASIGYLSLG LISNPHEPAS IVNFVLLGIG QISAFLGSQS LIGQEAPKAE RGSVIGMFNI SGAVGILIIT TLGGRLFDSM SPKAPFIVVG AINSLVMVAG IYVRIKFPGT VHLNEQH
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