Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1033 |
Symbol | |
ID | 6462655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1066873 |
End bp | 1069491 |
Gene Length | 2619 bp |
Protein Length | 872 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642727284 |
Product | DNA mismatch repair protein MutS |
Protein accession | YP_002017934 |
Protein GI | 194336140 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.256802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAG CCGAGGGTAC CATACAGAAA GAGCATTCTC CCATGATGCG GCAGTATCTT GAGGTTAAGG AGCGATATCC TGATTTTTTA CTGCTTTTCA GGGTGGGTGA TTTTTATGAA ACCTTTTTTG ACGATGCAGT CACGGTTTCA GCCGCGCTGA ATATTGTGCT GACCAAACGC ACAGCGGAAA TCCCCATGGC AGGCTTCCCG CATCATGCAA GTGAAGGATA TATAGCCAAA CTGGTCAAAA AAGGGTTCAA GGTTGCGGTT TGCGACCAGG TTGAAGATCC TGCGGATGCG AAGGGGATTG TTCGCCGGGA AATCACCGAT ATCATCACTC CTGGCATTAC CTACAGCGAC AAGGTGCTTG ACGACTGCCA TAACAACTAT CTTTGCGCTG TTGCCTTTCT CAAGGAGGGG AGGACGCTTC TTGCCGGTGT CGCCTTTATT GATGTTACCA CGGCTGAATT CAAAATTGCT TCGCTTCATA TCGAAGAGCT CAAGGATTTT GTTCTTTCAC TTCACCCCTC GGAAGTTCTT GTCTCCTCTG CCGAGAAGGA GCGGTCGGAA CTCCTGAAAA AGGCACTTTC GTCGGAGACG CTTGTTACAG AACTTGATTC ATGGATGTTC AGCGAAGATC AGGCGCAGGA GGTTCTTTCA CGGCAGTTCA AAACCCACTC CCTGAAAGGC TTTGGCATTG ACGGCAACCG GGCGGGCAGG GTAGCGGCTG CTGTTATTCT CCAGTATATC GAAGAGACCC GCCAGAATCG TCTGCACTAC ATTACCCGGA TAGGGGAGTT GCACAGCGCC GAGTATATGA CCCTCGACCT GCAGACCAAG AGAAATCTTG AAATTATCTC ATCCATGCAG GATGGCACAC AGAATGGAAG TCTGCTTCAG GTGATCGACC GCACCCGCAA CCCGATGGGG GCAAGGCTTC TGCGTCGCTG GCTGCAGAGA CCGCTGAAGC GGGTTGATGA GATCCGGATG CGGCTTGATG CTGTGGGAGA ACTCTCCGAA TGCCGCGAAA TGCGGGAGGC TCTTTCCGAA CAATTATCCG CCATCAATGA TCTGGAGCGC TGCCTTGCCC GTATTGCCAC GTTCCGTACC ATCCCAAGAG AGGTTCGTCA GCTTGGTTTA TCACTCTCGG CTATTCCGAT TCTTCAGGAA CTGCTTCGTG AGGCAGGCTC GGCCCGGCTC ATCGCTCTCG CGTCCAATCT GAAACCGCTC CCGGAACTTG CGGCATCTAT TGAACAGGCA ATTGACCCTG AATCGGGCGC ATCCATGCGT GATGGCGGCT ACATCCGCAC CGGATATCAC GCAGAACTTG ATGAACTCCG CACCATTGCC TCGACCGCTA AAGATCGTCT TCTACAGATT CAGCAGGAGG AGAGGGCAGC CACCACCATC TCATCGCTCA AGGTCAGTTT CAACAAGGTC TTCGGTTACT ATATCGAAAT CAGCCGAGCC AACATCGACA AGGTACCGGC CTATTATGAA AAAAAACAGA CCCTTGTCAA TGCCGAGCGC TATACCATTC CAGCCCTGAA AGAGTATGAA GAGAAGATTC TCAACTCCGA AGAGAAAAGC TTTCTACTCG AAGCGCAGCT CTTTCACGAC CTCTGCCTGC TTATTGCCGA GAACGCCTCC GCGATACAGG AAAATGCCGC ACTGATTGCC GAAATCGACT CTCTCTGCTC CTTTGCTCTC TGCGCCTCTG AATATGGCTA CTGCAAACCG GAGATCATGA CGCACGAAAA GCTTGCTATC GTTGGTGGCC GTCACCCGGT ACTCGAAAGG ATGATGAGCG CCGAGGATCC CTATGTGCCC AATGACTGCC ACTTCGATGA AAAACAGCAG ATGCTCATCA TAACCGGCCC CAACATGGCC GGAAAAAGCT CCTTTCTGCG TCAGACCGGC CTGATTGTTC TGCTCGCACA GGCAGGCAGC TTCGTTCCGG CTGAACGGGC GGAAATCGGG CTTGTTGACC GAATCTTTAC ACGGGTCGGC GCCTCCGACA ACCTCGCTTC CGGCGAAAGC ACCTTTCTGG TCGAAATGAA CGAAGCGGCA AGCATTCTTA ACAACGCCAC ATCAAAAAGC CTGCTGCTGC TCGATGAAAT TGGCCGGGGA ACCAGCACCT TTGATGGGAT GTCGATTGCC TGGTCGATGA GCGAATATAT CTGCCGTTCA ATCGGGGCAA GAACCCTTTT TGCAACCCAC TATCACGAAC TTGCCGAACT GGAAAGTCGT CTGCCCGGGG TGGTAAACTA CAACGCAACC GTCGTCGAAA CCGCCGATAG CGTCATCTTT CTGCGCAAGA TTATTCGCGG CTCCACCGAC AACAGCTATG GCATTGAAGT GGCCAAAATG GCCGGAATGC CTGCGGAGGT GATTTCGCGG GCCAAAGAGA TTCTTGCGGG GATGGAGAAG CGCGACATTC AAATTCCCCA AAACCGGCCA CCAAAAATAA AAAGTATGCA GATCAGCCTT TTTGAAGAGT CCGACAACCA GCTTCGCAAC GCGGTAGAGG CTCTTGACCT CGACCGCTTA ACTCCTCTCG ATGCCCTGCT GGAGCTAAAA AAGCTGCAGG AGCTGGCACG CAACGGGGGT GGCTATTGA
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Protein sequence | MSKAEGTIQK EHSPMMRQYL EVKERYPDFL LLFRVGDFYE TFFDDAVTVS AALNIVLTKR TAEIPMAGFP HHASEGYIAK LVKKGFKVAV CDQVEDPADA KGIVRREITD IITPGITYSD KVLDDCHNNY LCAVAFLKEG RTLLAGVAFI DVTTAEFKIA SLHIEELKDF VLSLHPSEVL VSSAEKERSE LLKKALSSET LVTELDSWMF SEDQAQEVLS RQFKTHSLKG FGIDGNRAGR VAAAVILQYI EETRQNRLHY ITRIGELHSA EYMTLDLQTK RNLEIISSMQ DGTQNGSLLQ VIDRTRNPMG ARLLRRWLQR PLKRVDEIRM RLDAVGELSE CREMREALSE QLSAINDLER CLARIATFRT IPREVRQLGL SLSAIPILQE LLREAGSARL IALASNLKPL PELAASIEQA IDPESGASMR DGGYIRTGYH AELDELRTIA STAKDRLLQI QQEERAATTI SSLKVSFNKV FGYYIEISRA NIDKVPAYYE KKQTLVNAER YTIPALKEYE EKILNSEEKS FLLEAQLFHD LCLLIAENAS AIQENAALIA EIDSLCSFAL CASEYGYCKP EIMTHEKLAI VGGRHPVLER MMSAEDPYVP NDCHFDEKQQ MLIITGPNMA GKSSFLRQTG LIVLLAQAGS FVPAERAEIG LVDRIFTRVG ASDNLASGES TFLVEMNEAA SILNNATSKS LLLLDEIGRG TSTFDGMSIA WSMSEYICRS IGARTLFATH YHELAELESR LPGVVNYNAT VVETADSVIF LRKIIRGSTD NSYGIEVAKM AGMPAEVISR AKEILAGMEK RDIQIPQNRP PKIKSMQISL FEESDNQLRN AVEALDLDRL TPLDALLELK KLQELARNGG GY
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