| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0814 |
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| Symbol | |
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| ID | 6461236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 850535 |
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| End bp | 851392 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642727067 |
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| Product | sulfur oxidation protein SoxA |
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| Protein accession | YP_002017721 |
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| Protein GI | 194335927 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3258] Cytochrome c |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00022188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TAGTGTTTAA CCGTTCTCTT GCGCTTCTGT TTGTTCTGGC AGCCCTGCTT
GCCGCAGTAA GGGTTGAGGC TGCCGATTAT CAGGCCCGTG TGCAGGCCGA TATACAGGCG
TTCAGGGATT ATTTTACCGC CCAGTTTCCC GACGTCAAGT TTGCCGATTA TGCAGATGGA
GTGTATGCCA TTGATGAGGA TTCCCGTCAG CAGTGGAAGG AGATGGAGGA GTTTCCTCCC
TATGCGCTAT CCGTTGAGGA TGGCAAAGCT TTGTTTGAAA TACCCTTTGC CAACGGTAAA
ACCTATGGAA GCTGTTTTGC AAATGGTGGC GCTGTCCGGC AGAACTATCC CTATTTTGAC
GAAAAAAAGG GAAAGGTGGT GACTCTTGAG ATGGCCATCA ATGATTGTCG GGTGGCTAAC
GGCGAAAAGC CACTGGCCTG TAAAACCGGT GATATTGCTA AAATATCTGC CTATATGGCT
TTTATCAGCA GGGGGAAGCC CGTTGATGTG AAGGTGCAAA GTGAAGGTGC ATATAAAGCC
TATGTAAAGG GCAAGGAGCT TTTCTACGCC AAGCACGGAA AGCTTAACAT GTCTTGCGCT
GGTTGCCATA TGCAGTATGC TGGAAGACGA CTTCGTGCTG AAATTCTTAG TCCGGCGCTT
GGTCATACCA CCCATTTTCC CGTTTATCGT TCAAAATGGG GAGAGATCGG CACCCTTCAC
AAACGCTATG GAGGTTGCTC CAATGATACC GGAGCCAAAT CGTTCGCCCC ACAGAGCGAG
GAGTACTGTA ATCTTGAGTT TTTCGAGACC GTGATGTCAA ACGGTTTGAT TTTTAACGGC
CCGGCTTCAC GAAAATAA
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| Protein sequence | MKKIVFNRSL ALLFVLAALL AAVRVEAADY QARVQADIQA FRDYFTAQFP DVKFADYADG
VYAIDEDSRQ QWKEMEEFPP YALSVEDGKA LFEIPFANGK TYGSCFANGG AVRQNYPYFD
EKKGKVVTLE MAINDCRVAN GEKPLACKTG DIAKISAYMA FISRGKPVDV KVQSEGAYKA
YVKGKELFYA KHGKLNMSCA GCHMQYAGRR LRAEILSPAL GHTTHFPVYR SKWGEIGTLH
KRYGGCSNDT GAKSFAPQSE EYCNLEFFET VMSNGLIFNG PASRK
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