Gene Ppha_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0500 
Symbol 
ID6462032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp490125 
End bp490760 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content52% 
IMG OID642726788 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_002017443 
Protein GI194335649 
COG category[I] Lipid transport and metabolism 
COG ID[COG0170] Dolichol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATGG AAGAGATTGA CCGGCTGGAA CTCCGTTATG AAGTAGCACG CAAGGCTATT 
CATCTCTCGT CGCTCTCTAT CCCGGTTATT TACTGGTTTA TCAGCCGCGA TCTTGCTCTG 
TTGATTCTTG TGCCGCTTTT TTCCGGCTTT TTTCTGATTG ACCTGCTGAA AAATTTTTTC 
ACACCGGTTT CTGCCTGGTA TCACCGGACG TTCGGAGCGA TGCTCAGGGC GCATGAGCTC 
AAGCGGGCAA AGGGCCATCT GAACGGTGCG ACCTATATCA TGATGGCGGC TCTCCTTCTG 
GTGCTCTTTT TCCCGAAAGT TATTGCGGTT GCGGCCTTCA GCATGGTTGC TGTTTCGGAT 
ACGCTTGCGG CCATTATCGG CAAATCGTTC GGTAAACACC GGTTTGGACA GAAGAGCGTT 
GAGGGAAGCG TTGCCTTTTT TCTCTCGGCG CTCGTTGTTG TCTCCCTTGT GCCGGGGCTG 
CATCCCGTTA TCGGTATCAT CATGGCAATA ACCGGAACGC TGACGGAGGC CTTCCTGGTG 
CGTATCGGAA AGTTCAAGGT TGACGATAAC CTTTCAATTC CTCTTGCCAG CGCTTCGGTA 
GCCACGCTCT TTACCCTTCT CTCCATTTTC CGGTAG
 
Protein sequence
MLMEEIDRLE LRYEVARKAI HLSSLSIPVI YWFISRDLAL LILVPLFSGF FLIDLLKNFF 
TPVSAWYHRT FGAMLRAHEL KRAKGHLNGA TYIMMAALLL VLFFPKVIAV AAFSMVAVSD 
TLAAIIGKSF GKHRFGQKSV EGSVAFFLSA LVVVSLVPGL HPVIGIIMAI TGTLTEAFLV 
RIGKFKVDDN LSIPLASASV ATLFTLLSIF R