Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_0374 |
Symbol | |
ID | 6462406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 358167 |
End bp | 358376 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642726662 |
Product | cold-shock DNA-binding domain protein |
Protein accession | YP_002017320 |
Protein GI | 194335526 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000381403 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTACTC AGGTTGAAGG AACAGTCAAA TGGTTCAACG AAGAAAAAGG TTACGGTTTT ATTGAGCAGA AAGGCGGAAA AGATGTTTTT GTACATCACA GTGCTATCAA TGGCACCGGA CGCAAAACTC TTGTTGAAGG CCAGAAAGTT ATGATGGAAG TAACTCAGGG AGCAAAAGGC CTCCAGGCTG AAGATGTAAC TCCTCTTTAA
|
Protein sequence | MGTQVEGTVK WFNEEKGYGF IEQKGGKDVF VHHSAINGTG RKTLVEGQKV MMEVTQGAKG LQAEDVTPL
|
| |