Gene Paes_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1296 
Symbol 
ID6460751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1415349 
End bp1416530 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content56% 
IMG OID642725283 
Productputative iron complex transport system substrate-binding protein 
Protein accessionYP_002015968 
Protein GI194334108 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.220074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCCC TGTCGGCACA GAGATCAGGG GCTGCCTGCC TCTGGCTGCT GATTGCAGCG 
GCACTGCTGT TTTCCGGATG CAATCCGTCG CAGGAACACG GCGCCCGTGA GCGGTCCGCT
GAACCTGAAC AGCCGGAGGT TGTCTATGCC CGCAAGTTCT CTCTCGGCTG GCAGTCCGGT
TACCGGGTTG TCAGGGTGAT GTCTCCTGAT CATTCGCTCG AGCACACCTA TATCCTCGTT
CCGGAGCACA TGCCTCTCCC GAACAATTCC GATGGAGCTA CTGTGCTGCG CATTCCGCTG
AAAAGCGTCA CCTGCGAAAA CGGGTTCCAG GTGTCGCTTC TCGATATGCT GGGCGCTTTC
GGGGCAATCA GTGGGGTATC GGGAAAAACA AGAATCGGTC ACGAGCAGGT GCACGCGAAG
ATCGACAGCG GGGCACTCGC GGTTACTGGA TTCATGCGGA GAATGAACAT GGAAACCCTG
CTCAAGCTCG ACCCAGATCT GGCTTTTGTC AACGTTTCAA GCGTCTCGTC GGATGTTTTT
GAAAAAATGA GCGCTTATGG CCTGTCGACC GGCTATTTCT GTGCATCGAT TGAGGAGCAC
CCTCTCGGCA CTCTCGAGTG GATCAAGTTC ATGGGCGCAT TTTTCCAGCA GGACAGCCTT
GCGGCTGCAC TTTTCCGGGA GCGCGAACAG GCCTATCTCG AACTTCAGCA GAAGACCGCG
AACAGAGAAG AAAAGCCGGC CGTGATAGCC GGGTACAGCA GGAAAGGGGC ATGGTCGACG
ATGGGGTCTT CCCGGTGGTT TGCCACGATG CTCGACCATG CAGGAGCTTC GTATCTCTAT
GAAGGCCTGG GGCTCGAGAG GGGGCATATT CTCAGCAACG AGGTTGCGAT GAACGCGGGC
ATACGTGCCG GGTTCTGGGT GAATACCCAT TTCAGGGTCA GGGACCTCGA TGCGCTTCTC
GGGATGGATC GCCGGTATGG CCTGTTTACA AGCGTCAGAC AGAAGACGGT CTACAACAAC
AACCATTCGT GTTTTTCAAA CGGAAGAAGC CGTTTCTGGG ATGTGGGCAT GACCGAACCC
CATGTCATCC TTGCTGATCT TATCAGTATT TTCCATCCGG ACCTGCTGCC GGACCATTAT
CTGGTCTATT ATCACAGGCT GCTTTACAAC GATGCTCGAT GA
 
Protein sequence
MRALSAQRSG AACLWLLIAA ALLFSGCNPS QEHGARERSA EPEQPEVVYA RKFSLGWQSG 
YRVVRVMSPD HSLEHTYILV PEHMPLPNNS DGATVLRIPL KSVTCENGFQ VSLLDMLGAF
GAISGVSGKT RIGHEQVHAK IDSGALAVTG FMRRMNMETL LKLDPDLAFV NVSSVSSDVF
EKMSAYGLST GYFCASIEEH PLGTLEWIKF MGAFFQQDSL AAALFREREQ AYLELQQKTA
NREEKPAVIA GYSRKGAWST MGSSRWFATM LDHAGASYLY EGLGLERGHI LSNEVAMNAG
IRAGFWVNTH FRVRDLDALL GMDRRYGLFT SVRQKTVYNN NHSCFSNGRS RFWDVGMTEP
HVILADLISI FHPDLLPDHY LVYYHRLLYN DAR