Gene Paes_0045 details

Gene Information

• Locus tag: Paes_0045
• ID: 6458918
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prosthecochloris aestuarii DSM 271
• Kingdom: Bacteria
• Replicon accession: NC_011059
• Strand: -
• Start bp: 46212
• End bp: 49535
• Gene Length: 3324 bp
• Protein Length: 1107 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 642724037
• Product: Patatin
• Protein accession: YP_002014758
• Protein GI: 194332898
• TIGRFAM ID: [TIGR03607] patatin-related protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.604758
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAAGCC CCACACCGGA CGCTCCCGAT TCCATCACCA AAGAGATTCG TTTTGCCGTC 
GTCATGTATG GCGGTATATC CCTGGCGATC TATATGAACG GCATTGCCCA GGAACTCCTG 
AGCATGGTTA CAGCCACTTC CGGAAAAAGC CCTGACGAAC AGAAAGGAAC CGCACGCATC 
TACTCGGCTA TCGCCCGAAG ACTCAACGAC ACCATCAATC AGACAAAGTG CGATCCGGCA 
TCGGAAGAAA AAAAGATCTT TCGCCACAAG TTCATCGTGG ACATCATCTC CGGCACATCA 
GCGGGAGGAA TCAATGGCGT CTGCCTGGCT AAAGGGCTTG TGTGCGGTCT TGACAATCTG 
AAAGCCCTGA AAAATACATG GCTCAATGAA GGAGATATCG ACAAACTGCT CAACGATAAC 
CAGTCTGAAC TCGATATCTT CTGTTCAAAA GAGCCGAAAA CTTCGCTGTT CAACAGCCAG 
AGAATGTACG CCAAGCTTCT GCAGGCGTTC AAGGATATGA GCGATGAAAG CGCCGCAGCA 
CAACCTGCTC CCCCGCATGT CGAAACGCTC GACCTCTTTG TTACCGCAAC GGACCTGCAA 
GGAATTCAGA CCCCGATCAT CCTCTGCGAC GGCCAAGCCA GAGAGCGAAT CCACAAGCAT 
GTCTTTCCGT TTTCCTTTCG CTCCACTGGC ACTTCGACCG GAAAGACTCC CGAACCGAAC 
CATTTCGACA GCACCCACGA CCCGATACTG GCTTTCGCAT CCCGCTGCAC ATCATCGTTT 
CCCGCCGCAT TCGAACCGGT GACACTCAAC GACACGCTTG CGTACCTCAA AAAACGCCAT 
CGACAGGAGT ATGCGACGTT CTGTCTCCAT CTGGAAAATG AGTGGAAAGA AGATTTCTTC 
AACTGCTACC AGGGCTACAC TGATGGCGTC CCGCTTGAAG AGCGGGAGTT CGCCGACGGC 
GGCTATCTGG ATAACAGACC GTTTGGCCAC GCCATCAAAG CCATCCACAA CAGATATGCT 
GACTGCCCCC TCGAACGCAA ACTGCTTTTT ATCGATCCTC TTCCTGAAAC AGATAACCGA 
CTCCGGGGAA GGACGGAAAA GAAAGAAATC TCGTTTGTCC AAAACGCTAC TCTGGCTGCG 
TTTTCACTGC CCAGCTATGA AACAATCCGC CAGGAAATCA ATGATCTTAC AGAGCGCAAT 
GCATGGGTAC GCACTGTCGA CAGCGTGCTG CAAAAAGTCG ATGCACAAAA CACACAACGC 
CTGAAATCGA TCATTGAAGA GGATTTCGAC ACCTATAGCG CCAAGAACAA AGAAAACTCT 
GAAGACCTGC AGCTTAAAAC AAAACTCTTC TCCAGTTATG CCGTCATGCC TCATGGAACC 
CAGGCATCGG AAACAAACCC TATCGCAGAC TTCTGGCACT ATATAGCAAG GCAGAAAAGC 
AGCAGCAAAC CAACCAGGCA GGAACAAAAA AAGATAGACG GCACCCGATA TGAAGAGATG 
GACCTCCTGG CCATGATAAA GAAACTGGGT GATGGCTATA CACCATACCA TTATACCAAA 
GTCACCGCCC TGACAGAACA GCTCGTCGAA ATGCTTGTCA GAGCCTGCGG TTTCGATCAT 
CGTCAGGACC TCTGCCAGCG TATGCGCACG CTTGTTGAAA ACTGGAGAAC AGAACATTTC 
AAATCACTCC AAAGCGAGTG CGCCTCCGAT AAGGATCAGC AGACAGAGAA CATTTTTTTC 
CGTAATTACG ATCTCGATTT CAGGATCCGC CGACTCGACT TCTTCCGAAA AAAAATCGAA 
ACCGCCATCG GAGCAGATAA CGTTTCAGCG CTCTATTTCG GCCTCTACGA CGCAGAGGAC 
AACGCTCCCT GCGATGAAGA GCTCCGCACC AGACTGATCG GGTTTTACGC AACGCTTGTC 
GAAGGCCTGA GGTCACTCTA CCGCATGAAA GAGCACCTGA TGTCACGGGG CCGTCGCAAT 
CCCTTCGCTC AGGAAATTGA TCGGCTTCTG CCTCTCCTGA AAGAAGATGC AGCACAAGCC 
GCTTCGGATG CTGATGCATC GTTCCCTGAA CGCTTTCACG CACTGATGAA ACGGCTGAAC 
GACCTGATAA AAGATGGATT TGAAGGGTGT ACCGGCTCCA TTGACGTCAG CACCATGATA 
GACGACGCGT TTATTACCCT CGGCACACCC TATCCGGCAA TAGCAGCAAG GATGAAGTAC 
ATCTATCGCT TCGGCTACGA CCTTTACGAC TCAACGACCT TCCAGCTGAT GGCCGGGGGA 
GACTATGGAG AAGGCACGCA AATAGAGATC TACCGCATAA GCCCTGCCGA TGCCACCTCA 
CTCTGGGATG AATCGACGCG AAAGAACAGG AAAGGAGAGA CGCTCTCCAA ACTTGCAGGG 
ACATCACTGG GCGCATTCGG AGGTTTTCTG GACCGGGAGT GGCGGCATAA CGATATCATG 
TGGGGACGTC TGGATGCAGC CGAAAGAATC ATCAACGTCC TGCTTCCACA AGACCGGGAC 
AATAGCGACA GCGACCGTGA TTTCCGAAGA GATATGATCG ATGATGCCCA TAGAATCATT 
ATCAGGGAAA CGCTTGAGGA GTGGAGCAAC GAGCTGGACA GCACCCGTTT CACTTCAAAC 
AGAGATGGCT CGCAATACGG GCGACTCAAG GAGATCCTCA AAGATATCGA TACAGAAGGA 
TGGCAAGAGA AGTTCAAGAC GAAGTACGAC TTCAACCGCG ATCTGGAACC AGAACCCAAC 
CTCCAGCGCC TCGGACGCTC CTCTGGAATA CTCTCTTCGA TGATCGACCG GCTCGATACC 
GGAGAAGGCA TGACGGGAAA AATCAGCGGC TACCTGAAAA AACTAAACTG GATTCTCCTG 
GGACTGCTTG ATTTTTCTAC ACCAAAAACC TTCAAAAGCG TCATTCTGGG CTACTGGATG 
AACCTCCTTG TGCTGGTCTC CGCAGTCATT ATCACTGGAG GCTACCTTAT CGACATTATC 
GACACTCAAA GTACGGCGGC GGCGTCATTC AAGGTTCTGG GCTTCGCATT GCTGGGAGTG 
ACAATTGTAA TACTGCTGTT CAGGCAACAC CTTGAAACCC ATATTCATCA GCTCTCATGC 
AGAAAGTCTA CCAGGCTCGC ACTGCAGATT CTCCAGTGGG GGGCTCTGGC ACTCCTGTGT 
ATCGCGCTTT TCATCCTGGT TTCGACACTC TACCAGGTCG GAGGCGAAAT CTGGGAGCTG 
TTGCGAAACT CGTACACTCA TAACCTGCAA GCCATCGCTG ATGCCATCCT GCGATTCATG 
TCAGGCCTCC TGCAACGCTC ATAA 

 

Protein sequence

MASPTPDAPD SITKEIRFAV VMYGGISLAI YMNGIAQELL SMVTATSGKS PDEQKGTARI 
YSAIARRLND TINQTKCDPA SEEKKIFRHK FIVDIISGTS AGGINGVCLA KGLVCGLDNL 
KALKNTWLNE GDIDKLLNDN QSELDIFCSK EPKTSLFNSQ RMYAKLLQAF KDMSDESAAA 
QPAPPHVETL DLFVTATDLQ GIQTPIILCD GQARERIHKH VFPFSFRSTG TSTGKTPEPN 
HFDSTHDPIL AFASRCTSSF PAAFEPVTLN DTLAYLKKRH RQEYATFCLH LENEWKEDFF 
NCYQGYTDGV PLEEREFADG GYLDNRPFGH AIKAIHNRYA DCPLERKLLF IDPLPETDNR 
LRGRTEKKEI SFVQNATLAA FSLPSYETIR QEINDLTERN AWVRTVDSVL QKVDAQNTQR 
LKSIIEEDFD TYSAKNKENS EDLQLKTKLF SSYAVMPHGT QASETNPIAD FWHYIARQKS 
SSKPTRQEQK KIDGTRYEEM DLLAMIKKLG DGYTPYHYTK VTALTEQLVE MLVRACGFDH 
RQDLCQRMRT LVENWRTEHF KSLQSECASD KDQQTENIFF RNYDLDFRIR RLDFFRKKIE 
TAIGADNVSA LYFGLYDAED NAPCDEELRT RLIGFYATLV EGLRSLYRMK EHLMSRGRRN 
PFAQEIDRLL PLLKEDAAQA ASDADASFPE RFHALMKRLN DLIKDGFEGC TGSIDVSTMI 
DDAFITLGTP YPAIAARMKY IYRFGYDLYD STTFQLMAGG DYGEGTQIEI YRISPADATS 
LWDESTRKNR KGETLSKLAG TSLGAFGGFL DREWRHNDIM WGRLDAAERI INVLLPQDRD 
NSDSDRDFRR DMIDDAHRII IRETLEEWSN ELDSTRFTSN RDGSQYGRLK EILKDIDTEG 
WQEKFKTKYD FNRDLEPEPN LQRLGRSSGI LSSMIDRLDT GEGMTGKISG YLKKLNWILL 
GLLDFSTPKT FKSVILGYWM NLLVLVSAVI ITGGYLIDII DTQSTAAASF KVLGFALLGV 
TIVILLFRQH LETHIHQLSC RKSTRLALQI LQWGALALLC IALFILVSTL YQVGGEIWEL 
LRNSYTHNLQ AIADAILRFM SGLLQRS