Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_5252 |
Symbol | |
ID | 6412953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5664527 |
End bp | 5665495 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642715142 |
Product | lipolytic protein G-D-S-L family |
Protein accession | YP_001994214 |
Protein GI | 192293609 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTAT CCGACCCTTT GAAACCTGCC GCCGTCGCGG CGTTTTTGGC GACGGCGTTG CTCCTGATCT CTTCCCCGGC CAGCTTCGCG CAGACCCCAT CGGAACCGGT CGCCGAGGCG GCGCCGACTG TGACGACCGG CGAGGGCGAG GTCGATGTTT CGACGCTGGA TCGCAAGAAA ACCGTCGCCG GGGCCGCGCT CGACAAGATC AAGGATGTGG CCAAGCAGGC CGGTGACATT CTCGGCCGCG TGCCCTGCCT GCCGCCGAAG GGCGGCGCCA AGTCGATCGG GGCGTTGCCG CGGGTCGCGC GCAAGCTGGC CGATCGCCGC CCGGTGGTGA TCGTGGCGTT CGGCTCGTCG TCGACCCAGG GCTACGGTTC GACCTCGCCG GCTTTCACCT ATCCGAACCG GCTGGCCGCA CAACTCCGGC GTCACTACCC GACCTCCGAC ATCACCGTCG TCAACAGCGG CAAGGGCGGC GAAGACGCGC CCGAAATGAT GCGGCGGCTG AAGTCCACGG TGCTGGATGC CCAGCCGGAT CTGGTGATCT GGCAGGTCGG CACCAACGCG ATCCTGCGCA ATCTCGATCC GGCCGACACC GGCAAGCTGG TCGACGACGG CATCAAGGCG ATCCAGTCCG CCGGCGCCGA TATCGTGCTG GTCGATCCGC AATACGTGCC GCGGGTCAAT GAGCGCGGCG AGAACGCCGG CAAGATGATC AAGGCGCTCG GCCGGCTCGC GGAGCTGCGC CGCGTCGGCA TCTTCCCGCG CTTCGAGGTG ATGAAGGAAT GGCACGAGCA GCAGGCCATC CCGTTCGACA AGTTCGTCAT CGCCGACGGG CTGCACATGA ACGACTGGGG CTACGCCTGC TTCGCGCAGC TGCTCGGCGA CGGCATCATC CGCTCGGTCG ATCAGGTCCG GCTCGGCACC GCCGGCCCGA GTGACGTCAC GGCATTCCGG CCGATGTAA
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Protein sequence | MRVSDPLKPA AVAAFLATAL LLISSPASFA QTPSEPVAEA APTVTTGEGE VDVSTLDRKK TVAGAALDKI KDVAKQAGDI LGRVPCLPPK GGAKSIGALP RVARKLADRR PVVIVAFGSS STQGYGSTSP AFTYPNRLAA QLRRHYPTSD ITVVNSGKGG EDAPEMMRRL KSTVLDAQPD LVIWQVGTNA ILRNLDPADT GKLVDDGIKA IQSAGADIVL VDPQYVPRVN ERGENAGKMI KALGRLAELR RVGIFPRFEV MKEWHEQQAI PFDKFVIADG LHMNDWGYAC FAQLLGDGII RSVDQVRLGT AGPSDVTAFR PM
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