| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5162 |
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| Symbol | |
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| ID | 6412862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5563241 |
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| End bp | 5565049 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642715052 |
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| Product | AsmA family protein |
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| Protein accession | YP_001994125 |
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| Protein GI | 192293520 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.63495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCGA TCAGGATCGC AGGCGCCATT GCGGCTCTGC TCCTCGTCGC GGCCACGCTG
CTGATCGCGA TCGGGATTCC GGCCGGCGCG CTGACCGGCG CGATCCAGAG CATGATCGAG
CGCGACACCG GCTACCGGGT GACGATCGCC GGGACCGGCA CCGTCCGGCT GTTCCCGGCA
GTCGCGCTCA CCTTGCACGA TGTCAGCGCC GAATTGCCGG GCGGCCGCAC CACCGATCCG
CGCCTGAAGA TCGCGACCGT CCGCGCCGAA CTGCCGCTGA CCAGCCTGAT CTCGGCGACG
CCTCGGCTTA CCGAACTGAC CCTGATCAGT CCTGAACTAC ATCTGCCGCT GCTGCGCCAG
CGCGACGAGG CCGGCGGCAC GCCAGCGCCC GCACGCAAAA GCAGCGCCGA GCTCGCCGAC
ATCGAACGCA TCGTGGTTCA GGACGGCGTC GTGGTGATGA CCAGCACGGC CGACAACATC
GAACGGCGCA TTGCCGGCAT TCAGGCCGAC ATCGAACGTG AGGATGCCGA CGGGCCGATC
ACCGCCAGTG GATCGGCCAC GCTCGGCCGC TCACCGCTGT CGTTCGAACT CACCACCACG
CCGCCGGCGG ATGACAAGCA GCCGATGCTG GTCGATCTCA CGCTCGATGC GCCGGGGCTG
CTGACGTCGC GGCTCAGCGC CAAGGCGGAA GCGCGGCTGC GCGGCACCAC GTTCGCGATC
AACGGCATCA GCGGCAAGCT CGGCGACGCG CCGTTCAACG GCTGGGCCTC GGTAGATGTC
GCCAGCAAGC CGGTGGTCAA GCTCGACCTC GATTTCCAGC GGCTGGACCT CATCGCTATC
ACCCGAACCG CGCCTCCCGG CTCACCGTGG AGCGAAACGC CACTCGATCT CGCCGGCCTC
AACTACGTCG ACGCCGACGT GCGGCTGTCC GCCACCGAAC TGCACATCGG TGCTGCTCGG
ATTGCACCGG CTTCGGCCGA CGCCAAGCTT GCCGGCGGGG TGCTGTCGGT GCAAGCCAGC
CGTCTCGCCG CCTATGGCGG GCAAGCGACC GGAAAGCTGA CGATCGACGC CTCCGGAACC
GTCCCCGCTT TCGATCTGCA GGGCGACCTC AGCGACGTTC ATGCGCTGCC GCTGCTCGAC
GGCCTCGCTG ATTTCGAGCG GCTCGATGGG CGGTTGCAGG CGAAGCTGGC ACTGCGCAGC
AGTGGCGGCA GCGCCCGCGC GATCGCCTCC AACCTGAACG GCAGTGCTGC GGTCGGGCTT
CGCGACGGCG CGATCCACGG CATCGATGTC GTCCGGATGA TCCGCAATCT GACCGCCCAC
ACCCAGGACG GCTGGCAGAT CGCTCCGACC GACGCCACAG ATCTCAGCGA ATTCGCAGCC
TCGTTCCGGA TCGCCCAGGG CAAGGCCGAG ACCTCCGATC TCAAGCTTGC CGGCCCGCTA
GTGCGAATGA CTGGCGCCGG AGCTATCGAC CTGCCGACTA AAACACTGGC GCTCAAGGTT
GAGCCCAAGC TGGTGCTGAC GACACAAGGA CAGAGCGCGT TGGAGCGAAG TGTTGCGCCC
GCCCCGGAGC CGATCGGCTT CGGCATTCCG GTCAGGATCG AGGGCCCGTG GATCGCACCG
CGCATCTTCC CCGACATCGC CGGCGTGCTC GACGATCCGG ATAAGGCGTA TCAGCGCCTG
CGCGAAGTCG GCAGCGGCCT GCTCGGCAGC AGTCGCGACG ATCGCAACAA CTCAGGCGAC
GCCAGCCGCT CTGACGGCGA CAGCGGTGCG GCGGTGAACG CGATCATCAA GCAGCTATTC
GGACGGTGA
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| Protein sequence | MKPIRIAGAI AALLLVAATL LIAIGIPAGA LTGAIQSMIE RDTGYRVTIA GTGTVRLFPA
VALTLHDVSA ELPGGRTTDP RLKIATVRAE LPLTSLISAT PRLTELTLIS PELHLPLLRQ
RDEAGGTPAP ARKSSAELAD IERIVVQDGV VVMTSTADNI ERRIAGIQAD IEREDADGPI
TASGSATLGR SPLSFELTTT PPADDKQPML VDLTLDAPGL LTSRLSAKAE ARLRGTTFAI
NGISGKLGDA PFNGWASVDV ASKPVVKLDL DFQRLDLIAI TRTAPPGSPW SETPLDLAGL
NYVDADVRLS ATELHIGAAR IAPASADAKL AGGVLSVQAS RLAAYGGQAT GKLTIDASGT
VPAFDLQGDL SDVHALPLLD GLADFERLDG RLQAKLALRS SGGSARAIAS NLNGSAAVGL
RDGAIHGIDV VRMIRNLTAH TQDGWQIAPT DATDLSEFAA SFRIAQGKAE TSDLKLAGPL
VRMTGAGAID LPTKTLALKV EPKLVLTTQG QSALERSVAP APEPIGFGIP VRIEGPWIAP
RIFPDIAGVL DDPDKAYQRL REVGSGLLGS SRDDRNNSGD ASRSDGDSGA AVNAIIKQLF
GR
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