| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4881 |
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| Symbol | |
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| ID | 6412567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5247003 |
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| End bp | 5248331 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714758 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001993845 |
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| Protein GI | 192293240 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCT TGACGCGCCC TTCCAAGCTG CCCCTCATCG CTCCGTTTCT CGCACTGGCT
CTAGTTGCTG TATCCCCCGC CCTCGCCCAG CGCGGTGCCT CGTGTCACGG CGGGCAGAGC
TTTCCGCAGT TCCTCGCGGG CCTGAAACAG AAAGCCGTTG CGGCCGGGGT GTCGCAAGGC
GCGATCGCCG AAGCGTCGCC GTATCTCGTG TACGACCAGG GCATCGTCAA TCGCGACCGC
GGGCAGCGGG TGTTCGGGCA GATCTTCACG GTGTTCGCCG GACGGATGGC TTCCGAAGGA
CGGCGCGTCA AAGGCCAGCA ACTGATCAAG CAATACGCGC AGGCGTTCGC GCGGGCCGAG
AAGGAATATG GCGTGCCGCC GGCGGTAATC GCCGCGTTCT GGGCGCTGGA GAGCGATTTC
GGTGCGGTGC AGGGCAATCT GCCGACGCTG CGCTCGCTGG TATCGCTGGC CTATGACTGC
CGCCGCTCCG AGATGTTCCA GGACGAGACC ATCGCGGCGC TGAAGATCAT CGACCGCGGC
GACCTGACGC CGGGCGAGAT GATCGGCTCC TGGGCGGGCG AGCTCGGCCA GACGCAATTC
CTGCCGCGGC ACTATTTCGA CTACGCGGTC GACTATGACG GCGACGGCCA CCGCGACCTG
TTGCACAGCG CGCCCGACGT GATCGGCTCG ACCGCCAACT ACATCGCCAC CGGGCTGAAA
TGGCGGCGCG GCGAGCCTTG GCTGCAGGAG GTGCGCGTGC CGGAGAACCT GCCGTGGGAT
CAGGCAGATC TCACCGTGAA GCATCCGCGC TCGCAATGGG CGCAGTGGGG AGTTACCACC
GCGGACGGCC GGCCGCTGTC CAACGACGCG CTGCCGGCCT CGCTGCTGCT GCCGATGGGA
CGGCACGGCC CGGCGTTCCT CGCTTATGCG AACTTCGCCG CCTACACCGA GTGGAACAAC
TCGCTGATCT ATTCGACCAC CGCGGCCTAT CTCGCCACCC GCATCGCCGG AGCCGGGCCG
ATGCAGAAGC CGCGTGCCGC TGTCGCTCAG CTCTCGTTCA ACGAGATGAA ACAGCTGCAG
CAGCTTCTGG TGCGCGCCGG CTTCGACGTC GGCAAGGTCG ACGGGGTGCT CGGCCAGCAG
ACCCGCAGCG CGGTGAAGAC GATGCAGCTC AAATACGGCC TGCCGGCGGA TTCCTGGCCG
ACCGCCGAAC TGCTCACCCG CATGGGCGGC AGCGCGGCGC CAGCGCCTTC GGCTTCTGCA
GAACCGATGC AGCCGACCGA GCCGCGGCGC GCCAAGCGCG CCCCTCCGCC AGCACCGCTG
CCGCAATAG
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| Protein sequence | MKLLTRPSKL PLIAPFLALA LVAVSPALAQ RGASCHGGQS FPQFLAGLKQ KAVAAGVSQG
AIAEASPYLV YDQGIVNRDR GQRVFGQIFT VFAGRMASEG RRVKGQQLIK QYAQAFARAE
KEYGVPPAVI AAFWALESDF GAVQGNLPTL RSLVSLAYDC RRSEMFQDET IAALKIIDRG
DLTPGEMIGS WAGELGQTQF LPRHYFDYAV DYDGDGHRDL LHSAPDVIGS TANYIATGLK
WRRGEPWLQE VRVPENLPWD QADLTVKHPR SQWAQWGVTT ADGRPLSNDA LPASLLLPMG
RHGPAFLAYA NFAAYTEWNN SLIYSTTAAY LATRIAGAGP MQKPRAAVAQ LSFNEMKQLQ
QLLVRAGFDV GKVDGVLGQQ TRSAVKTMQL KYGLPADSWP TAELLTRMGG SAAPAPSASA
EPMQPTEPRR AKRAPPPAPL PQ
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