| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4850 |
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| Symbol | |
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| ID | 6412536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5211727 |
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| End bp | 5212560 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642714727 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_001993814 |
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| Protein GI | 192293209 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGCT CTGCTCAATC TCCCCTGCAA CAGCTCGGCG GCACGGTGGT TCTTGCCGGC
GCCGGCAAGA TGGGCGGTGC GCTGCTCACC GGCTGGCTGG CGCAAGGGCT GGACGGCGGC
GACGTCGTGG TGATCGAGCC GCATCCGACC GAGGAGATCG CGGCGCTGAG CGCGCGCGGC
GTCCGCCTCA ACGCCTCCGC CGGCGATGTC GGCGCGGTGT CGACGCTGGT GGTCGCGGTC
AAGCCGCAGA TGTTCGCCGA AGCCGCCGCC GCGCTGCGCG GCTATGTCGG GCCGTCGACC
CTGGTGGTGT CGATCATGGC CGGCAAGCCG ATCGCAGCGC TCTCCGAGCA GCTCGGCGGC
CACGTCGTCC GGGCGATGCC GAACACCCCG GCCGCGATCG GCCGCGGCAT TACCGTCGCG
GTCGCGGCCG GTAATGTGAC GGCCGCGCAG CGCAGCATTG CCGATGCGCT GCTGCGCGCC
ACCGGCGGCG TCGAATGGGT CGACGACGAA GCGCTGATCG ATGCCGTCAC GGCGGTGTCC
GGCTCGGGCC CGGCCTACGT GTTCCTGCTC GCCGAAGAAC TCGCCCGCGC CGGCGTCGAA
GCCGGCCTGC CGGAAGGCCT CGCCATGACG CTCGCCCGTG CCACCGTCGC CGGCTCCGGC
GAACTGCTGC ACCGCTCCGA CCTCGATGCC GCCACGCTGC GCAAGAACGT CACCTCCCCC
GGCGGCACCA CTGCCGCGGC GCTTGAGGTG CTGATGGCGG ACGACGGCTT CCGCCCGCTG
CTGACCCGCG CGGTCGCAGC GGCAGCGAAG CGGTCGAAGG AACTGGCGAA GTAA
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| Protein sequence | MTSSAQSPLQ QLGGTVVLAG AGKMGGALLT GWLAQGLDGG DVVVIEPHPT EEIAALSARG
VRLNASAGDV GAVSTLVVAV KPQMFAEAAA ALRGYVGPST LVVSIMAGKP IAALSEQLGG
HVVRAMPNTP AAIGRGITVA VAAGNVTAAQ RSIADALLRA TGGVEWVDDE ALIDAVTAVS
GSGPAYVFLL AEELARAGVE AGLPEGLAMT LARATVAGSG ELLHRSDLDA ATLRKNVTSP
GGTTAAALEV LMADDGFRPL LTRAVAAAAK RSKELAK
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