| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4098 |
|---|
| Symbol | |
|---|
| ID | 6411782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 4397819 |
|---|
| End bp | 4398862 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642713980 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001993069 |
|---|
| Protein GI | 192292464 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000500149 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTCTG TTGTCTCGTT TGAACAGGCG ATGCATGCGA TTAGGGATGT AAAAAACAAG
CATTTGCTTC TGGGCAACGG CTTTAGCATT GCCTTGAAGC CCGACATTTT TACGTATGGC
TCCCTCTACG AGAACGCCGA TTTCAGCAAG GCGCCGCATG TTACGAAGCT TTTTGATGCC
CTCAAAACGC AGGATTTCGA GGTTGTCATC AAGCACCTTC AGGATGCAGC CACTGTTGTC
GAGGTATACA GGCCAAGTGC TGTCACGCTT GCGCGCAGCT TAAGAAATGA CGCTGCCGCG
ATCAAGGAAG CGCTCGTGAC GGCAATCGCC AAGCGCCATC CAGACCGGCC TTACGATGTG
AAGCCCGAGC AATACGCAGC GTGTCGCGCC TTTTTGTCTC GCTTCGGACA TATCTTCACA
CTGAACTATG ATGTGCTGCT GTACTGGACG CTCATGCAGA GCGAGGTGGA TTCCTTACAA
TTGAAGCATG ATGACGGATT TAGGCATCCC GAAGACGACC CCGCCGCGCC ATGGGTTTCG
TGGCAGCAGG GCAATTCGGC AACCGTTTTC TATCTCCATG GCGCTCTTCA TTTATTCGAT
GCCGGATCCG AAATCACAAA ATACACTTGG TCAAAAACCG ACAAACCAAT TGTCGACCAG
ATAAGGTCCG CGCTCGACGA AGAGAAATAC CCGCTTTTTG TTTCAGAGGG GACGAGTGCC
AGTAAGAAGG CGCGGATCCT TCACAGTGGT TATCTCCATA AAGCGCATCG CAGTTTCGAG
GGATGCTGCG GCCCGGCGGG AAATGGCATC GTCATCTACG GCCATTCGCT CGACAATAAT
GACGACCATG TTCTTCGGTG CATTGCCAAA GGTAACTGTA GTTGTTTGGT TGTAAGCCTT
TTCGGCAACC CCTCCTCCGC AGCCAACAAG GCCGTCATAG AAAAAGCGGA ACGACTGGCC
GCATTGCGAG GCCCCGCAAA AGGGAAGCGC CAAGCGTTGG ATATCATCTA TTACGACGCC
GCTTCCGCAA AAGTTTGGGG ATAG
|
|---|
| Protein sequence | MVSVVSFEQA MHAIRDVKNK HLLLGNGFSI ALKPDIFTYG SLYENADFSK APHVTKLFDA
LKTQDFEVVI KHLQDAATVV EVYRPSAVTL ARSLRNDAAA IKEALVTAIA KRHPDRPYDV
KPEQYAACRA FLSRFGHIFT LNYDVLLYWT LMQSEVDSLQ LKHDDGFRHP EDDPAAPWVS
WQQGNSATVF YLHGALHLFD AGSEITKYTW SKTDKPIVDQ IRSALDEEKY PLFVSEGTSA
SKKARILHSG YLHKAHRSFE GCCGPAGNGI VIYGHSLDNN DDHVLRCIAK GNCSCLVVSL
FGNPSSAANK AVIEKAERLA ALRGPAKGKR QALDIIYYDA ASAKVWG
|
|---|
| |