| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4089 |
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| Symbol | |
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| ID | 6411773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4387327 |
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| End bp | 4388049 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713971 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_001993060 |
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| Protein GI | 192292455 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.404092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCG CACCACCATC GATTCTCGTC GTCGAGGACG ACCGCGAGAC CCGCGCGCTG
ATCGCCAAAT ATCTCCGCGC CAACAACTGC AACGTCGCCA CCGCCGCGGA CGGCCGCGAG
ATGGAGCGCT GGATCGCCGA TCATCGCGTC GATCTGGTCG TGCTCGACGT GATGCTGCCG
GGCGAGGACG GGCTCAGCCT GTGCCGGAAG ATCCGCGCCA ATTCGGCGCT GCCGATCATC
ATGCTGACCG CGCGCGGTGA CGACGTCGAC CGCATCCTCG GCCTCGAGAT GGGCGCCGAC
GATTACTTGC CGAAGCCGTT CAATCCGCGC GAACTGCTGG CACGGATTCG CTCGGTACTG
CGCCGGCAGG CGAGCGCCGT CACCGCCAGC GCCACACCCG GCGCCACCAC GCTCGGCTTT
CTCGGCTGGC GGATGGATTG CCGGCGGCGC GAACTGCGCA ATCCCGACGG CGCGCTGGTG
GCGATGACCA GTGCCGAATT CGACCTGCTG CAGGCGCTGT GCGAGCGGGC CGGCCGGGTG
CTGTCGCGCG AGGCGCTGCT CGATCTCACC CACGGCCGCA ACGTCGGCGC GTTCGAGCGC
TCGATCGACG TGCTGATCAG CCGCATCCGC CGCAAGATCG AACCCGATCC GCGCGAAGCC
ACGCTGATCA AGACGGTGCG GGCCGGTGGC TACGTGTTCA CGCCGGAGGT CGAAACCGCA
TGA
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| Protein sequence | MSTAPPSILV VEDDRETRAL IAKYLRANNC NVATAADGRE MERWIADHRV DLVVLDVMLP
GEDGLSLCRK IRANSALPII MLTARGDDVD RILGLEMGAD DYLPKPFNPR ELLARIRSVL
RRQASAVTAS ATPGATTLGF LGWRMDCRRR ELRNPDGALV AMTSAEFDLL QALCERAGRV
LSREALLDLT HGRNVGAFER SIDVLISRIR RKIEPDPREA TLIKTVRAGG YVFTPEVETA
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