Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4055 |
Symbol | |
ID | 6411738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4353673 |
End bp | 4354056 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642713937 |
Product | hypothetical protein |
Protein accession | YP_001993026 |
Protein GI | 192292421 |
COG category | [S] Function unknown |
COG ID | [COG5462] Predicted secreted (periplasmic) protein |
TIGRFAM ID | [TIGR02209] cell division protein FtsL |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0047292 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCGGC TCGTGCACGT GCTGGTGATT GGGATGCTGG TGTTCGCAGC GGCCTATGTG TACCGGATCA AGATGGAGTC GACGGTGCGC ACCGAGAAGG TGCTGCAGAT CCAGGCCGAG CTCCGCAAGG AGCGCGAGGC GATCGCCCGG CTGCGCGCCG AATGGGCCCA GCTCGACTCG CCGGGCCGGC TGCAGGGCCT CGCCGCCCGC CACCTCAAGC TCAAGCCGGT CGGCGCGCGG CAGTTCGATG CGCTGAAGAA CCTGCCCGAG CGGCCGCCGG CCGTCGTCGA TCCCAGCGCT CCCGATCCGA TCGCCTCGAT GATCGAAAAG ATCGACCCCG ACATCGTCAC CGGCTCGCTG CCGGCTCCGG AGCCCGCCCA GTGA
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Protein sequence | MMRLVHVLVI GMLVFAAAYV YRIKMESTVR TEKVLQIQAE LRKEREAIAR LRAEWAQLDS PGRLQGLAAR HLKLKPVGAR QFDALKNLPE RPPAVVDPSA PDPIASMIEK IDPDIVTGSL PAPEPAQ
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