Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4005 |
Symbol | |
ID | 6411687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4292023 |
End bp | 4293174 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642713887 |
Product | HflK protein |
Protein accession | YP_001992976 |
Protein GI | 192292371 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.906349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTGGA AGAATCAAGG CGGAGGCCCG TGGGGTTCGG GCCCCAAGGG TCCGTGGGGC TCGGGGCCAC AATCGTCGGG ACCGCGGCCG CCTGATCTCG AAGACCTGCT CCGTCGTGGT CAGGACCGGC TGCAGCAGAT CCTTCCCGGC GGCCATTTCA GCGGGCTCGG TATCGCCATC GTGCTGCTCG GCGCGCTCGC GATCTGGGGC CTGTCGGGCT TCTTCCGCGT CCAGTCGGAA GAACTCGGCG TGGTGCTCCG CTTCGGCAAG CACGTCCGCA CCGTGCAGCC GGGTCTGAAC TATCACCTGC CGTATCCGAT CGAGACCGTG CTGCTGCCGA AGGCGCTGCG CGTCAACACG ATCAGCATCG GCATGACGCT GATCAACGAT CCGGCCCGCC GCGGCGCGAC CATGCACGAC GTGCCGGAAG AGAGCCTGAT GCTGACGGGC GACGAAAACA TCGTCGACGT CGACTTCACC GTGCTGTGGC GGATCAAGCC CGACGGCGTC GGCAACTACC TGTTCAACAT CCAGAGCCCG CAGGGCACCG TGAAGGCGGT GGCCGAGAGC GCGATGCGCG AAGTGATCGG TCGCTCCGAC ATCCAGCCGA TCCTCACCGG CGCCCGCACC ACCATCGAGA ACGCCGTGCA GGAACTGATG CAGAAGACGC TCGACAGCTA CGGCGCGGGT GTCTTGATTC AGCAGGTGCA GATGCAGAAG GTCGACCCGC CGCAGCAGGT CATCGACGCG TTCCGCGACG TCCAGGCCGC ACGCGCCGAC CTCGAGCGAC TGCAGAACGA AGCGCAGACC TACGCCAACC GGGTAATCCC CGACGCCAAG GGCCGCGCCT CGCAGATCAT CCAGAACGCC GAAGGCTACA AGGGGCAGGC GATCGCCGAG GCCAAGGGCC AGAGCGCGCG CTTCCTCGAC GTCTTTGAGG AATACAAGAA GGCGCCGGCG GTGACCCGCG AACGCATCTA TCTCGAAACC ATGGAACGCG TGCTCGGCTC AGCCGATAAG CTGGTTTACG ACCCGGGCGC AGGTAACGGG CAGGGCATCG TGCCGTATTT GCCGCTGAAC GAACTGACCC GGCGCTCGTC GCCTCCCGCA ACCGTGCAGC AGAACCAGTC AGTGGGCGGA GGCAACCGAT GA
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Protein sequence | MPWKNQGGGP WGSGPKGPWG SGPQSSGPRP PDLEDLLRRG QDRLQQILPG GHFSGLGIAI VLLGALAIWG LSGFFRVQSE ELGVVLRFGK HVRTVQPGLN YHLPYPIETV LLPKALRVNT ISIGMTLIND PARRGATMHD VPEESLMLTG DENIVDVDFT VLWRIKPDGV GNYLFNIQSP QGTVKAVAES AMREVIGRSD IQPILTGART TIENAVQELM QKTLDSYGAG VLIQQVQMQK VDPPQQVIDA FRDVQAARAD LERLQNEAQT YANRVIPDAK GRASQIIQNA EGYKGQAIAE AKGQSARFLD VFEEYKKAPA VTRERIYLET MERVLGSADK LVYDPGAGNG QGIVPYLPLN ELTRRSSPPA TVQQNQSVGG GNR
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