| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3764 |
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| Symbol | |
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| ID | 6411442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4040396 |
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| End bp | 4042213 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642713645 |
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| Product | hypothetical protein |
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| Protein accession | YP_001992738 |
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| Protein GI | 192292133 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCCG ACTGCGCTCG TCTTGGGCGC CCCATATCCT TTCTTGGTCA GCTCCGCGTT
CGGGCGCGCC GATTGGCGCC GTTTGTGGTG ACTGGAGCCC TCATGGCTGC CGGCGCCGCC
CTCAATCTGC GAGGTGCCCT CGCCTCGGAC GTCACCGGAG AGCGTACGGA ACAAGGAGCT
AGCCCTTGGG GCGTCGCCAC CGGCGCCGAA TGGCTTGATG ATCATCGCCG GTTCAATCCG
ATCCTGGCGA AGGCGGGCGT GAAATGGCTG CGGGCCTTTC AGGAATGGCA GACCGTTCAG
CCGACCCAAG ACACCTGGAA CTGGGCCCCG GCGGACCGAC TCGTCAGCGA TGCAACGGCG
AACGGCCTCA GCCTCCTGTA TCCGCTGGCC TATCTGGCTC CCTGGGCCTC CGCCGATGGC
GGCACCCGCG CGTTCCCCAT TAAGGACATC CAGTACTGGA AAGACTACGT CGGCGCCGTC
GTCGAGCGCT ATCGTGGGTC GGTGAAACAC TGGGAGATCT GGAACGAGTT CAACGGCAGC
TTCGCCGTCA ACGGAAGTCC ATCCACCTAC GCCGAGTTGG TGAAGGAAGC GTCGACTGCC
GCCAAGCGGA TCGATCCATC GGCAAAGATC GGAGTTAGCG TTGCAAATTT CGACGTCAAC
TTCCTTGAAC GCGCGATCGA AGCGGGCGCC GCCGGTCATT TCGACTTCAT CTGCGTGCAT
CCCTACGAAA AGCTCGATCT GCTGGAGGCT GGAGGCGAGA TCGAATTCAT GGCGATGGCA
TCGACGCTGC GGCGGATGCT TGCCTCCCAT AATCTCGACA GCTCGCTCCC GCTGTGGATC
TCGGAGGTCG GGGCGGTTGC AACCACTGAG CCAAGGTCCG AAGCAGGCCA ATCGCGACTG
CTGACAAAAG CCTACATCCT TGGGCTCGCC TCCGGTTTCG ACAAGATCTT CTGGTTCGAG
GCGCGAGGCC CCGCCTATCA CGATCAGGCA GACCATGGAT TGCTTCGGGC AGACTTTTCA
CCGCGCCCCT CATTGGCGGC GCTTGCAACT TTGATCCGTC TGCTGGGCGA TCACCCGAGC
TATCTTGGAT GGGTCCGAGC GGACGCCGAC AGTCTGGGCT TTGTCTTCGA GGGCCGACAA
GGCTTCGTAT TGGCAGCTTG GACGACCTCG AACAAGACGG TGGAAGCGAC CTTCCAGTCG
CCGGTTCTGG TCACGCGTAC CGACGGCTCG GAGGTCACCG TAGATAGCGG CAAGCCCCTG
AGCCTGTCGT CCACGCCCCT GTTCGTTTCG AAGCTTCCGG ACACGATCGT GCAGCAGGCG
AAGAAGAATC GCGATCTGCC GATCCTGCAA GATGTCGACT ATTCGAAGGA AACCACCGTC
ACGATCTCTC TTGGTGAGAC CAATCGCGGC GGCGGTCTCC AGCAAATCAA TCCGCAGACC
ACCAAGGTGT TCTCGGACGA GGGTTCAACC TCGCGGCGGC TTGATTTTTC AGTCGCGAAC
GATGAAGGCC ACTACGCCTA TTTCGCGGTA TCTCCGCAAT TTGCTCCGTG GGGTACCCGT
CGCTTGCAGA TCACCGCGAC GGTCAAACGG TTGCCTGGAA GTCCGAAGGC CGGCTTCAGC
TTGGACTATG AATCCCAGCG GGGCTACGTC AACGCCTCAT ATCGCGAGAT ACCGAACGAG
GAGGACTGGC AGGAACTGAC GTGGACGATC GATGACGCGA ATTTCGTCGG TCAGTGGGGC
TGGAATTTCC GCATCAACGC GATTGCCTCG CCCAGCGAGT TTCTGATCAA GGACGTTCGG
GTGAAAAAGC GGCCATGA
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| Protein sequence | MASDCARLGR PISFLGQLRV RARRLAPFVV TGALMAAGAA LNLRGALASD VTGERTEQGA
SPWGVATGAE WLDDHRRFNP ILAKAGVKWL RAFQEWQTVQ PTQDTWNWAP ADRLVSDATA
NGLSLLYPLA YLAPWASADG GTRAFPIKDI QYWKDYVGAV VERYRGSVKH WEIWNEFNGS
FAVNGSPSTY AELVKEASTA AKRIDPSAKI GVSVANFDVN FLERAIEAGA AGHFDFICVH
PYEKLDLLEA GGEIEFMAMA STLRRMLASH NLDSSLPLWI SEVGAVATTE PRSEAGQSRL
LTKAYILGLA SGFDKIFWFE ARGPAYHDQA DHGLLRADFS PRPSLAALAT LIRLLGDHPS
YLGWVRADAD SLGFVFEGRQ GFVLAAWTTS NKTVEATFQS PVLVTRTDGS EVTVDSGKPL
SLSSTPLFVS KLPDTIVQQA KKNRDLPILQ DVDYSKETTV TISLGETNRG GGLQQINPQT
TKVFSDEGST SRRLDFSVAN DEGHYAYFAV SPQFAPWGTR RLQITATVKR LPGSPKAGFS
LDYESQRGYV NASYREIPNE EDWQELTWTI DDANFVGQWG WNFRINAIAS PSEFLIKDVR
VKKRP
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