Gene Rpal_2510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2510 
Symbol 
ID6410172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp2708105 
End bp2708665 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content64% 
IMG OID642712388 
Productflavin reductase domain protein FMN-binding 
Protein accessionYP_001991498 
Protein GI192290893 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.365491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGAC ATCCGCGCAA GACCGACTTT CCCGTCTCGG CGGTCCGCCG CTATCTCGAA 
CCGGGCCCGA TCGTGCTGGT GAGCTCGCAC TGGCGCGGCG CGCACAACAT CATGACGCTC 
GGCTGGCACG TCGTGCTGGA ATTCACCCCG TCGCTGATCG GGCTGATGAT CTCCAGCGGC 
AATCATTCGT TCGAGATGAT CCGCGCCTCC GGCGAATGCG TCGTCAATCT GCCGACCACC 
GCGCTGACTG ATATCGTCGT CGGCATTGGC AACACCTCGG GCGCCGAGAT CGACAAATTC 
GCGCATTTCG GGCTGACTGC GGAGAAGGCG ACGGCGGTCG CCGCGCCGCT GATCGCCGAG 
TGCCACGCCG CGTTCGAATG CCGGCTGCAC GACGATGCGC TGGTCGACAA ATACAACTTC 
TTCATCTTCG AAGTCGTGAA GGCGCACGTC GCGCCCCGGC CCAAGCATCC GCAGACGCTG 
CACTACACCG GCGACGGCGT ATTCATGGTC GCCGGCAAGA CCATCAGCCG CAAATCACTG 
TTCCGGCCGG GGATGCTGTG A
 
Protein sequence
MIRHPRKTDF PVSAVRRYLE PGPIVLVSSH WRGAHNIMTL GWHVVLEFTP SLIGLMISSG 
NHSFEMIRAS GECVVNLPTT ALTDIVVGIG NTSGAEIDKF AHFGLTAEKA TAVAAPLIAE 
CHAAFECRLH DDALVDKYNF FIFEVVKAHV APRPKHPQTL HYTGDGVFMV AGKTISRKSL 
FRPGML