Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2414 |
Symbol | |
ID | 6410076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 2602234 |
End bp | 2602905 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642712293 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001991403 |
Protein GI | 192290798 |
COG category | [R] General function prediction only |
COG ID | [COG2910] Putative NADH-flavin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.596261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGTTC TGATTTTCGG CGCCACCGGC CGCACCGGGC GCCATTTAGT GGCGCAAGGC GTCGCCCGCG GCTGGACGGT GTTCGTCGCT GGCCGCGATC CGGCGCGATT GAACGAACTC GGCGGCATTG CCGGCGTCGC GAGTGTCGAT GTGGCGGACA CCACTTCGGT GGCGGGGGCG CTGAACGGAT TGAAGCCGCA GGCGATCGTC TCGACGATCG GCGGCGCCGG GCCTGACGCG CTGCTGATCG ATGAAGTCGG CAACAACGCG ATCACCGACG CCGCGGCGGC GTGCGGCGTG CGGCGGGTGC TTCAGGTCTC GTCGCTCGCC TGCGGCGATA GCCGCGCCTA TGCGTCGGAA CGAATCATTG CCGCGATCGG GCCGGTGCTC GACGCTAAGA CCCGCGCCGA AGACCATCTG CGCAACGCCG CGCTCGACTG GACGATCGTG CGGCCGGGCG GGCTGACCGA CGGCGACCCC ACCGGGCAGG GGGCGCTGTA CGACGATCCC CGGGTGCACG GCCGGATCGC GCGGGCGGAC CTCGCCACGC TCCTGATCGA CGCGCTGGCG ACGCCGGCCA GCATCGGCTG CGTGCTGTCG GCGGTCGATC GCACGACGCT GCCGGCTGAA CCAGCCGATA TCGCTGAATT CGATCTCGCC GCGACGGTGT GA
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Protein sequence | MRVLIFGATG RTGRHLVAQG VARGWTVFVA GRDPARLNEL GGIAGVASVD VADTTSVAGA LNGLKPQAIV STIGGAGPDA LLIDEVGNNA ITDAAAACGV RRVLQVSSLA CGDSRAYASE RIIAAIGPVL DAKTRAEDHL RNAALDWTIV RPGGLTDGDP TGQGALYDDP RVHGRIARAD LATLLIDALA TPASIGCVLS AVDRTTLPAE PADIAEFDLA ATV
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