| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1544 |
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| Symbol | |
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| ID | 6409201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1630069 |
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| End bp | 1635201 |
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| Gene Length | 5133 bp |
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| Protein Length | 1710 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711438 |
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| Product | ATP-binding region ATPase domain protein |
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| Protein accession | YP_001990553 |
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| Protein GI | 192289948 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAACCT CGCAGCAGAC ATGTCACGGC GAGGTGCGGT GCAGCTCGGC GGAGTCGAGG
CCCTACCAAG CGATCGATCG CCAATGGTGG TCCGAACTCA CTTTTTCCTT CACAGGCCTG
ATTGACGGGA TCGAAACCCA TCTCGCGGAG GACAAGAGCG GTCGAACCTG GCGCGTCCGC
AGCGCGGCAG CGGGAACTTA TGCAGCGGCC CGATTGGAGC GCGAGGCGAC GATCGCGGCC
CGCGTGGGTG CCGCCGCGGC CGAGTTACCC GCCTATGTCG GCAATAGCGA CAAGGTCGTC
CTGGTCTATC CCGCCGCCGT CCATCGCGCA TTGGCATCGT TGCCGATCGG CGAGGTCGCG
GTCGATCGCT TTCTCGCAAT TGCAGAGGCC GCGGCCATTT CGCTGTCGCG AGTGCATGCA
TGTGACGTCG TTCACGGAAC CCTGGACCCT GGCAAAGTCC TGCTCGACAA GAACGTCAGC
GTCCGTTTTG CGGAGTTCGG CCGGGCGCGC CTGACCGGGC AGGAGCTTGC GCCCGATATG
CCCGGCCTGC CACAGATCGA CTTCAAGTAC GCGGCCCCCG AACAGGCCCG GCGTGATCAT
CCCGTGCTGG ATGCGCGAAG CGACCTCTAT GCACTGGGAG TGATCCTCTA CGAATTTCTG
GTCGGTCGTC CGCCACTGCT CGCGGCGAGC ATTGCCGAGT GGCTACACGC CCATGTGGCG
ATCGATGTGC CGCCGCCAAG CCATGTCCGG GCGCGTATTC CGCCCGCGAT CGATGCAGTT
CTGCTCAAAC TGTTGGCGAA AGATCCTGAC CAGCGCTATC AGACCGCGGG CGAGCTGCAG
GCCGAGATTG CACGGATAGC AGTCTTGCGT GGAGCGGCAG GCGCGGAGGA TGCACTTTCC
TATCCGTCCG GGAAGCTGGC CGTCCGGACC CGTCTCGCCG ACTCGTTGTT TGGCCGCAAC
GCCGAGCTCG ACAGCTTGGC TCGTTCGCTG GACAATGTGC GGCAATCCTG CAGGGCCGAA
GTGGTGCTGT TGTCGGGGCC ACCAGGAGCT GGAAAATCCG CTCTCGTCGG CCATCTGCTG
AAGCGCGTCA GTCCGGGCGA CGCCATTAGC GCTGTCGGCA AGGGCGACCC GCTGCGCAAG
GCGATCCCGT ACGCGCCTAT TGTTCAAGCA CTTCGGTCGG CCATGATCAG CCTCGTGGCC
GGGGACCTCG GCGAGGCGGT ACGTAGTCGC CTCGCCGAGG TCCCTGGCTG CGGCCGGCTG
CTGACCGAAC TCGTCCCCGA TGTCGAGCTG CTATCAGGTA GCAGTCGGCC TCTGCCCGAG
GTTCCTGCCC ATCTCGCCCA GGTCCGCACC ACGCGCATCA TCCGCGAGAC CTTCGCCGCG
CTCGCCTCTG CGCAAACGCC GCTGGTTCTG TTTCTCGACG ATCTGCAATG GTTCGACGGC
GCCAGTCTCG ATGTCGCCAA GGCGCTGCTC GACGCGCGTT CCTCGCACAT CCTGCTGATC
TGCAGCCATC GCAGCGACGA ACGCAGCGAC GGTCCCTGGC GTTCGCTGTC CGACGAAGCG
CGCGCCTCCG GCATTCCCTG CACCGAGATG AAGCTCGCGG CGCTTTCGCC GGGCGATACG
GGCGAACTAA TCGCTTTCGC CCTGGACCAG CCGGTGGAGC AGGTCGGAGA GCTGTCGGCG
ATCATTCATC GCGAGACCAA CGGCAATCCG TTCTACATCG GCCAGCTCGT GCAGAAATTG
ACCGACGAAC AGATCGTTTC GTTCGACGGG GCTCGGCAGC AGTGGGTGTG GGACCAGGAC
CGCCTATTTC AGGGCTTCAC GGTGATCGAA TTCATGGCGC GCCGGCTCGA GGCGCTGCCC
AAGCGCCAGC GCGAGGTGCT TCGTCATCTC GCTTGTCTTA GCCGGCGCGG ATCGATCGAG
GTTCTGGCCG GTCTGACGGC GATTTCCTCG GACGAAGTGC GCAAGCTGGT CGACAGTCTG
GTGCAGGCCA ATCTCATCTC GCGCGCGGGG GAGTATCTCA CATTCTCGCA CGACCGCGTT
CGCGAGGCGG CCTATTCGCT CACGCCGGAG GAGCGCCGGC CGAGTGAGCA CTTGCGTATC
GCGCGCTACT TCCTTGCTGC CGGAGACGGC TATTGCAGCC CGGATCTGGC GTTCGATATC
GCGACCCAGA TCACACGTGC TGACAGAAGC AGGCTGGAGG ACCGCGAGCG TGTGATCTTC
GCCGGGGTTC TTTTGACCGC GGTCAGGACG TCGCGGTCGA CCGGCGCGGC CGAACAGGCG
CTGCGGTTTC TCGACGTCGC CCGCGATCTG CGATCGCCCA GCGGCGTCCC GGACGGCGAG
TTTCCGGTGT TCGCGATCGA GTGGCTGCGA TGCGATTGCC TGCTCGCCCT CGCCAATACC
GAGGACGCGC TCGCTGCGCT CGGCGGCTTG CTGGACGTCG TCGTCGCGCC TGTTGAAATC
GCCGACACCT ATCGTCTTCG CGCGCTGGCT CTGACCATCA GGTCCGACTA CGATTCGGCG
ATTGAGGCTG CGTTGCAGGG CCTTTCGGCG CTCGGCATCG AAATCGAGCG TCTGCCTGAT
CTGCGCAACT TGGAGCGGGT GTATTGGACC TGCCAGGGGC GTCTAGAACA ACTGACCCCT
GCCGGGATTC TGGCGCTCCC CGACGCATCC GATGACATCG CGCGCACGGC ACAGCCGCTG
CTGTCGACGT TGATCTCCGC GTCCTTCGTT CCCGGCGACC TCCGTTTCCT GCACGTTCTC
AAAATCGTGG AGCTCACTCT GGACTACGGC CTGACGCCGG AGTCCGCCTA TGGGCTGGCA
TGGTTCGGCG TGTACGGCGC GCATCACTTT GCGGCGTATG GACAAGGAGT GCTGTGGGCG
GAAGTCGCCT GCCGGATGGT GGAGCGCGAG GGCTACGAGG CGCAGCGGGC CGCGGCGCTG
ATCGCGCTGG ACCAGGTCAG CGTCTGGACC AGGCCGATGC GCTTTGCGCT GGAGCGCGCG
CGCGAGGGCG CTCGCGTCGG ACAAGCCGCC GGCGATCTCG GCATGGCCTG CTACGCGCGC
AACCACATCG CCTCCAATCT TCTCGTGCTA GGCGAGCCGC TCGACGCCGT TCGCGGCGAG
ATATCGGAGG GGCTCAGCTA CACTATCGCG ATCGGCTACA AGGATATCGA ACGTATCCTC
GACGCCCAGA TGGGCCTCGT CACCGCGCTG CTGAGCGGCG ACAGCGACCG CCATCGCGCC
TCCGACGCCG ACTCCATCAC GTCGAAGGTG ACCCAGTTCT GGGTAAGCTA CTACGCCGGC
GTCACCGCCT TGCTGTTCAA TCGCGATGCA GCGGCGCTGC GCCATCTGGA GAAGGCGATG
GACTTGGCGT GGTCCGCGCC GGCGCACATC GACACCGCGC AGTGCCAGTT CTTCTTCGCG
CTGGCGTCGT GCCGTTCGAT CGCGGCAGGC CGACCGACCG ACGACAAGAT CGCGCGGCTC
TACACGGTCC GCACGCGCTT CGCCGAATGG GCGCGTCTGA ATCCGGACAC GTTCGAGAGC
AAGTCTCTCC TGCTCGATGC CGAGGCCGCC CGGCTGAGCG GCGACGGCGC AGCCGCGCAG
CGATTGTACG AGCGGGCCGC TCGTGCGGCG GAGAGAACCG GCTTCATCCA CGATCAAGCG
CTCGCCCACG AACTGGCCGG GAACTACTAC GTGGAGGCCG GGCTGTTCGC TCCGGCGCAG
GGCTGCCTGA TTGCGGCGGG CGCCTGCTAT CGCCAATGGG GCGCGATCGG CAAAGCGACG
CATCTCGCCG TCCGATTTCC GCAGCAAGCG GGCCGGGTCG CTCCGGCGGA GGACGGCGCC
GGCCAGCGCG AACTCGATCT CGCGGCGCTG ACCGCGGCGG CCCAGACGCT GGCCGAAGAG
GTCGGCCTCG AGCAGGTACT ACGAACCCTG ATGCGGAGCA TGATCGTTCA TGCGGGTGCA
CAGTTCGGTT TGTTCCTGCT GGTCCAGGAC GGCGTTGCGG GAATCGAGGC ATCTGCGAGA
GTTGAGAGAC AGGAGATTCG AGTCGACCTC TATGGCGCGA TCCCGACCGA CGACGACCTG
CCTTTGGCGC TGTTGAAGAC CGTGATGCGG ACCAAGAAGG CCGTCACCTT CGCCGACGTC
TCGGCGGACG CACCGCAGCT CGATGCTGCA GGGCCGCGCC GCCGGGCCGC CCGCTCACTG
GCTTGCATCC CCTTCATCAA GCGCGGCGAT CTGGTCGGTA TGCTCTATCT GGAGAATTCG
CTGGCCGCCA ACGTCTTCAC TCCCGGCCGG ACGGCGATGC TCGAGGTGCT CGCCGCGCAG
GCGGCGATCT CGCTGGACGC GGCGCGGCTG TATCGCAACC TGATCGACGA GAACCGGCGC
CGTGCCGAGG CGGAGTTTCA ACTGCGCGAG GCCCGCGCGG AACTGGGGCG GACGTCGCAG
ATGACCGCGC TCGGCAGTTT CGCCGCCTCG ATCGTGCACG AGATCAATCA GCCGATCGCC
AGCATTCTGG CGCAAACTGA GGCCGCGCTG CGCTGGCTCA ACCGGGAGCA GCCCGACATC
GCCGAGGTCA CCCAAGGGCT GACCCGGATC AGGAATTCCG GACGCCGCAC CGCCGATATC
GTGAAATCGC TGCGCTCGCT GGGCAAGCAG GCGCCGGCGA CGTTCTCACC GATCTGTCTG
GAAGAGGTGG TCGAAGAGGT GATGCGGCTG ATCGCCGAGG ACCTCGACGC CGGTAGTGTG
CAGATCACGG TGGTGCTCTT GGATCAGCGG CGGAGGATCT CCGCCGATCG CGTCCAGCTG
CAGCAGGTCA TCTTCAACCT CGTCACCAAT GCGATTCATG CGATGGCCGA GATGGAGGAG
AGCGCGAGGC GGATCGTGAT CAGCACCACC GAAGCCGGCG ACGGAATGGT TCGCCTCACC
ATCGAGGACA GCGGCTGCGG CATGTCCGAG GAGGTGCGCG GCCGGATTTT CGAACCGTTC
TTCACCACCA AGACAGCCGG GATGGGCGTC GGGCTTGCGA TCTGCCGCTC GATCGTGGAG
CTGCATCGCG GCACGATCAG CGTGCGATCG ACGCCCGGGC AGGGCAGTAC GTTCGAGATC
GCCATCCCCG TCTCCGAGCA CGTCGCGCCC TGA
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| Protein sequence | MATSQQTCHG EVRCSSAESR PYQAIDRQWW SELTFSFTGL IDGIETHLAE DKSGRTWRVR
SAAAGTYAAA RLEREATIAA RVGAAAAELP AYVGNSDKVV LVYPAAVHRA LASLPIGEVA
VDRFLAIAEA AAISLSRVHA CDVVHGTLDP GKVLLDKNVS VRFAEFGRAR LTGQELAPDM
PGLPQIDFKY AAPEQARRDH PVLDARSDLY ALGVILYEFL VGRPPLLAAS IAEWLHAHVA
IDVPPPSHVR ARIPPAIDAV LLKLLAKDPD QRYQTAGELQ AEIARIAVLR GAAGAEDALS
YPSGKLAVRT RLADSLFGRN AELDSLARSL DNVRQSCRAE VVLLSGPPGA GKSALVGHLL
KRVSPGDAIS AVGKGDPLRK AIPYAPIVQA LRSAMISLVA GDLGEAVRSR LAEVPGCGRL
LTELVPDVEL LSGSSRPLPE VPAHLAQVRT TRIIRETFAA LASAQTPLVL FLDDLQWFDG
ASLDVAKALL DARSSHILLI CSHRSDERSD GPWRSLSDEA RASGIPCTEM KLAALSPGDT
GELIAFALDQ PVEQVGELSA IIHRETNGNP FYIGQLVQKL TDEQIVSFDG ARQQWVWDQD
RLFQGFTVIE FMARRLEALP KRQREVLRHL ACLSRRGSIE VLAGLTAISS DEVRKLVDSL
VQANLISRAG EYLTFSHDRV REAAYSLTPE ERRPSEHLRI ARYFLAAGDG YCSPDLAFDI
ATQITRADRS RLEDRERVIF AGVLLTAVRT SRSTGAAEQA LRFLDVARDL RSPSGVPDGE
FPVFAIEWLR CDCLLALANT EDALAALGGL LDVVVAPVEI ADTYRLRALA LTIRSDYDSA
IEAALQGLSA LGIEIERLPD LRNLERVYWT CQGRLEQLTP AGILALPDAS DDIARTAQPL
LSTLISASFV PGDLRFLHVL KIVELTLDYG LTPESAYGLA WFGVYGAHHF AAYGQGVLWA
EVACRMVERE GYEAQRAAAL IALDQVSVWT RPMRFALERA REGARVGQAA GDLGMACYAR
NHIASNLLVL GEPLDAVRGE ISEGLSYTIA IGYKDIERIL DAQMGLVTAL LSGDSDRHRA
SDADSITSKV TQFWVSYYAG VTALLFNRDA AALRHLEKAM DLAWSAPAHI DTAQCQFFFA
LASCRSIAAG RPTDDKIARL YTVRTRFAEW ARLNPDTFES KSLLLDAEAA RLSGDGAAAQ
RLYERAARAA ERTGFIHDQA LAHELAGNYY VEAGLFAPAQ GCLIAAGACY RQWGAIGKAT
HLAVRFPQQA GRVAPAEDGA GQRELDLAAL TAAAQTLAEE VGLEQVLRTL MRSMIVHAGA
QFGLFLLVQD GVAGIEASAR VERQEIRVDL YGAIPTDDDL PLALLKTVMR TKKAVTFADV
SADAPQLDAA GPRRRAARSL ACIPFIKRGD LVGMLYLENS LAANVFTPGR TAMLEVLAAQ
AAISLDAARL YRNLIDENRR RAEAEFQLRE ARAELGRTSQ MTALGSFAAS IVHEINQPIA
SILAQTEAAL RWLNREQPDI AEVTQGLTRI RNSGRRTADI VKSLRSLGKQ APATFSPICL
EEVVEEVMRL IAEDLDAGSV QITVVLLDQR RRISADRVQL QQVIFNLVTN AIHAMAEMEE
SARRIVISTT EAGDGMVRLT IEDSGCGMSE EVRGRIFEPF FTTKTAGMGV GLAICRSIVE
LHRGTISVRS TPGQGSTFEI AIPVSEHVAP
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