| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0859 |
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| Symbol | |
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| ID | 6408513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 911266 |
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| End bp | 911997 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710773 |
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| Product | nuclease (SNase domain protein) |
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| Protein accession | YP_001989892 |
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| Protein GI | 192289287 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAGC TGAACACATG GCTGCTGCCG CTTTTGCTCC TGCTGCTGCC GATGACGGCC
CAGGCCGCCG ACATCAGCGG CGTGCCGAAG ATCCGCGACG GCGACCATGC GCTGATCGGG
AAGACCCGCA TCCGGCTCGC CGGCATCGAC GCTCCGGGGG TGGATCAGCT TTGTCTCAAC
CCTAAGGGTG ATCGCTGGAC CTGTGGCGTC GCCGCCCGTG ACGCGCTGGC TCAGCATACC
GCCGGCAAGA GCTGGACCTG CCACGTCCTG CGCGTCGACA AGGCCGGCCG CTCGATCGCC
AAATGCGAGG TCGACGGCGA AGACCTCGGA CGATGGATGG TGAAGAACGG CTGGGCGCTG
GCCTATGTGC AGTACTCCCA CGCCTATGAG GCCGAGGAGA AGGCCGCCCG CGAGGCCAAG
ATCGGACTGT GGCAGGGTTC GTTCATCGCA CCGTGGGACT GGCGAGTGCG CAGTGCAAAG
ACTCAAATTC TTGGCGCCAC CAAACCGCCG AAGGATGCCC GGCGGATTCT ACTGGCGTCG
GCCTCCGGCC CGGTCGCGCC GTCGCCGGAT TGCACCATCA AGGGCAACGT CAACAAATCC
GGCGAGTGCA TCTACCACAA GCCGACCAGC CGCTGGTACG CGCAGATCCG CATGAAGATC
AGCAAGGGCA CCCGCTGGTT CTGCTCGGTC GAGGAAGCCG AGGCCGCCGG CTGCCGCGAG
ACGCGGCGCT AG
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| Protein sequence | MLKLNTWLLP LLLLLLPMTA QAADISGVPK IRDGDHALIG KTRIRLAGID APGVDQLCLN
PKGDRWTCGV AARDALAQHT AGKSWTCHVL RVDKAGRSIA KCEVDGEDLG RWMVKNGWAL
AYVQYSHAYE AEEKAAREAK IGLWQGSFIA PWDWRVRSAK TQILGATKPP KDARRILLAS
ASGPVAPSPD CTIKGNVNKS GECIYHKPTS RWYAQIRMKI SKGTRWFCSV EEAEAAGCRE
TRR
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