| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0763 |
|---|
| Symbol | |
|---|
| ID | 6408416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 804323 |
|---|
| End bp | 805051 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642710677 |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_001989797 |
|---|
| Protein GI | 192289192 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02325] phosphonates metabolism transcriptional regulator PhnF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.747826 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG AGGCACTCTC TTCAGGCGTC GCATTGTGGC GTCAGGTCGC CGACGGCATC
GAGCTGGCGA TCGCCGACGG CCGCTATCTG CCCGGCGGCA AGCTGCCGGG CGAGACCGAG
ATCGCCGAGA ACTACGGGGT GAATCGCCAC ACCGTACGGC GGGCACTCGC AGCGCTGGCG
GAGCGTGGAT TGGTGCGCGC CGAGCGCGGC AGCGGCACCT TCGTGCGCAG CCGGCGGATC
GCCTATCCGC TGCGCACCCG GACGCGGTTT TCCGAAATCA TCAATGCGGG CGGGCGCGAA
CCGCGCGGGC AGTTGATCGC CGCGGAGCGC GAGGCCGCGA CCGGTGCGCT GGCCGGGCAA
CTCGATCTCG ACATCGGCGC GCCGCTTTTC CGCATCGAGG CGCTGCGGTC GGCGGATGGC
GTGCCGATCA GCCGCGGCAC GACCTGGCTG TCGGCGGTGC GATTTCCCGA TGCGCCCAAG
GTTTTCGCGG CGAAACGCTC GATGACCAAG GTGCTGGCGC ATTACGGCAT CAGCGATTAT
CGCCGGTTGT CGACCCGGAT CACCGCCTCG GTGGTCGATG CCGCCGATGC GGCGCGGCTC
GATCTGGCGG CAGGGCGGCC GGTGCTGGTG GTGGAGAGTA TCGATGTCGC TGCCGACGGC
ACCCCGCTGC TCACCTCCCG CGCCCGCTTC GCCGCTGAGC GGGTCGAGTT CGTGATCGAG
CCGGATTAG
|
|---|
| Protein sequence | MTAEALSSGV ALWRQVADGI ELAIADGRYL PGGKLPGETE IAENYGVNRH TVRRALAALA
ERGLVRAERG SGTFVRSRRI AYPLRTRTRF SEIINAGGRE PRGQLIAAER EAATGALAGQ
LDLDIGAPLF RIEALRSADG VPISRGTTWL SAVRFPDAPK VFAAKRSMTK VLAHYGISDY
RRLSTRITAS VVDAADAARL DLAAGRPVLV VESIDVAADG TPLLTSRARF AAERVEFVIE
PD
|
|---|
| |