Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0671 |
Symbol | |
ID | 6408323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 711599 |
End bp | 713191 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642710585 |
Product | protein of unknown function DUF935 |
Protein accession | YP_001989706 |
Protein GI | 192289101 |
COG category | [S] Function unknown |
COG ID | [COG4383] Mu-like prophage protein gp29 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTGAGCA TTCTGGGGCC TGACGGCAAT CCGGTCGACA CCTCGCTGCT GTCGAAGGAA GTCGCCACGC CGACCGTGAT CGGCGTGCGC GCCGTGCATC ACGAGCGCGT CGCCACCGGT CTAACGCCGG AGCGACTGGC CTATGTGCTG CACCAAGCGG CGATCGGTTC CGCGCGCGAT TACCTGACGC TCGCCGAGGA AATGGAAGAG CGCTATCTGC ACTACGCCTC CCAGGTGCAG ACCCGCCGGC TGGCGATCGA GGGTGTCGAG CCGTCCGTTG CCGCGCCGAA CGGCGTGCCG ACGAAGATCG TCGATTTCGT TCACGAGCTG GTCGAGGACC CCAACTTTCA CGACATGCTC GGGCTGCTCA CGGACGGCAT CGCCAAAGGC TACGCGGTGG CGGAGCCGAT CTGGGAGTAC GAGCGCAAAG CGCTGCGGCC GGTCGCCTAC AAATGGCGCG ACCAGCGGTT CTTCCAGTTC GACCCGGTAT CGCAGACCGA GCTGCGCCTG GCTGTCGACG GCAGCTCGGA AGGCGAGCCG CTGGCCAAGC CGACCTTCAT TGTGCATGCG CCGCGATCGA AGGCCGGCAT TCCGATCCGC CGAGGCTTCG CGCGCGCCGC GGCGTGGGCC TTCATGCTGC AGTCGTTCGC CCTGAAGGAC TGGAGCGCCT TCGCGGAGAT CTACGGCATT CCGCTGCGGC TCGGCCGCTA CCATGCCGGC GCCAGCGAAG GCGACAAGAA AGCGCTGCTG CAGGCGGTGC GCTCGATCGC GTCCGATGCT GCGGCGATCA TTCCGCAAGG CATGCAGCTG GAGTTCATCG AGACCAAGGG CCAGCGCGGC GAAGCCGTGT TCGGTTCGTT GCTCGACTAT CTCGACAAGG GCGTCTCGAA GCTGGTGGTC GGGCAAACCA TGACGTCCGA CAACGGCGCG TCGATGGCGC AGGCCAAGGT GCACAACGAG GTCCGCCTCG ACATCCAGCG CGCCGATGGC GTGCAGCTGT CCAACACCGT CACGCGCGAC ATCGTCGAAT GGGCGGTGGC GATGAACTTC GGGCCCCAGG ACGTCTATCC CCGCGTCGTC TTGCCTGTTG CCGAACCCGA GGACACGAAG GCGATGGCCG ATGGCGTCGC CAAGTTGGTG CCGTTTGGCC TTCGCGTGAA GCAGTCGGAG ATCCGCGGCA AGTTCGGTCT CTCCGAGCCG AGCGACACGG ACGAATTGCT TACACCCCAG CGGCAGACCT CGACCCAGCA CGAGATCGTT GCGGCGAACG ACCCGAAGAA AGCCGCGCGG CTATCGGCCG GTGATTGCCG GTGCCCGTCT TGCGGCGGCA CGCGTAGCGC CACGCTTGCA GCGGAGCCAA ACGCCGAGGC TGATGAATTG GACGAGCTGG TCGCCGATGC GATGGCCGAT TGGGAGGAAC TGGTCGATCC GCTGCTGGCG CCGCTGCGCG AGGCGGTGGC GCGGGCATCG AGCTTCGACG AACTGCTGGC GATGATGCCG GAGCTGGCCG CCGAGGTCGA CGGGAGCAAG CTGGCCGAGG CGCTGGCGCT GCTCACCGCC AAGGCCCGCG GCCTCGGCGA CGTGAAGGAC TAG
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Protein sequence | MVSILGPDGN PVDTSLLSKE VATPTVIGVR AVHHERVATG LTPERLAYVL HQAAIGSARD YLTLAEEMEE RYLHYASQVQ TRRLAIEGVE PSVAAPNGVP TKIVDFVHEL VEDPNFHDML GLLTDGIAKG YAVAEPIWEY ERKALRPVAY KWRDQRFFQF DPVSQTELRL AVDGSSEGEP LAKPTFIVHA PRSKAGIPIR RGFARAAAWA FMLQSFALKD WSAFAEIYGI PLRLGRYHAG ASEGDKKALL QAVRSIASDA AAIIPQGMQL EFIETKGQRG EAVFGSLLDY LDKGVSKLVV GQTMTSDNGA SMAQAKVHNE VRLDIQRADG VQLSNTVTRD IVEWAVAMNF GPQDVYPRVV LPVAEPEDTK AMADGVAKLV PFGLRVKQSE IRGKFGLSEP SDTDELLTPQ RQTSTQHEIV AANDPKKAAR LSAGDCRCPS CGGTRSATLA AEPNAEADEL DELVADAMAD WEELVDPLLA PLREAVARAS SFDELLAMMP ELAAEVDGSK LAEALALLTA KARGLGDVKD
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