| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0450 |
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| Symbol | |
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| ID | 6408098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 485722 |
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| End bp | 486225 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710362 |
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| Product | protein of unknown function UPF0054 |
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| Protein accession | YP_001989486 |
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| Protein GI | 192288881 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCACA GTGCTCGTCC TTTCACCGAA GTCGTGATCG AAGCCGATTG CTGGCAGGCC
GAAGCATCGG CCGAAGCAAC CGTGCTGCGC GCGATCGAAA CCGCCGCCGA TGCGGTCGAC
GCCGACACCG GCGGCGCTGA GCTGGCCGTG ATGCTCACCG ACGACGATCA CATCCGTCAG
CTCAACGCCT CGTTCCGCGA CAAGGACAAG CCGACCAACG TGCTGTCGTT TCCTGCCGCG
CAGCCCGAGG TGCAGCCGGA CGGCGCGCCA CGGATGCTCG GTGACATCGC GATCGCGTAT
CAGACCGTCC GCCGCGAGGC CGACGACGAA GGCAAACCTT TCGATCACCA CCTCAGTCAC
CTCGCCGTGC ACGGCTTCCT GCATCTGGTC GGCTACGACC ACGAAACCGA TGAGGAAGCC
GAGGAGATGG AAGACGCCGA ACGCGCAATC CTGGCGCGGC TCGGGATTCC GGATCCGTAT
GCAGGCCAGG ATCGGGTGAG CTGA
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| Protein sequence | MTHSARPFTE VVIEADCWQA EASAEATVLR AIETAADAVD ADTGGAELAV MLTDDDHIRQ
LNASFRDKDK PTNVLSFPAA QPEVQPDGAP RMLGDIAIAY QTVRREADDE GKPFDHHLSH
LAVHGFLHLV GYDHETDEEA EEMEDAERAI LARLGIPDPY AGQDRVS
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