Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0440 |
Symbol | infB |
ID | 6408088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 473193 |
End bp | 475844 |
Gene Length | 2652 bp |
Protein Length | 883 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642710352 |
Product | translation initiation factor IF-2 |
Protein accession | YP_001989476 |
Protein GI | 192288871 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGATA CGAAAACTCC TGGCGACAAG ACTCTGACGA TGCCGACCAA GACCTTGACG CTGAAGCCCC GCGTCGAGCA GGGCGTCGTG CGCCAGAGCT TCAGCCACGG CCGTAGCAAG CAGGTGGTGG TCGAAAAACG CGGCAAGCGG CGCCTTGGTG GCGACGAGCC GGCCGCGCCG GCGGCGCCTG AAGTGGCGAA GAAGCCGGCA CCGGCACCCG CCGCACCGCC CCGGCAGCAG CAGTCGCGCC CCGCGCCGCA GCAGTCGCGT AGCGGTATGG TGCTGCGCAC CTTGACCGAG GACGAGCGCA CCGCCCGCGC CACCGCGCTG GCCGATGCCC GCGTGCGCGA GATCGAAGAG CGCAAGCAGG CCGAGATCGA AGCGCAGCGC CGCGCCGAGC AGGAAAAGAT CGAGAAGGCC GAGCGCGAAG CCGCCGAGGC GCGCCGCAAG GCCGAGGAAG AGCGTCACCG CCAGGAAGAC GAAGCCAAGC GGAAGGCCGA GACTGAAGCC AAGAAGCGCT TCGGCGACGC CGAGCCGGCC AAGAAGCCGG CCGAGACCTC GACCACCACC ACGACGGCTG CGCCTGCCCG TCCGGCGACC ACGACGACGC GCGCTCCGAC TCCGGCAGGC CGTCCGCCGG CCGTTGCAGC CGAAGCTGGC GACGACGATG AAGCCCCGCG GATGATCCGC CGTCCGGGCG GCCCCGCCCG TCCGGCGCCG CCGCCGAAGC AGCCGGCCGC CAAGCCGGGC GCCTCGAAGC AGCGCGGCCG TCTCACCGTC GTCACCGCGC TCAATGCCGA TGACGTGCGC GAACGTTCGA TCGCCTCGTT CCGTCGCCGT ACCCAGCGGC TGAAGGGCCA CGCCTCGAAC GAGCCGAAAG AAAAGTTGGT GCGTGAAGTC GTTATTCCCG AAGTGATCGC CATCCAGGAA CTCGCCAACC GCATGTCCGA ACGTGCGGTC GACGTGATCC GCCTGCTGAT GAAGCAGGGC GCGATGCACA AGATCACCGA CGTGATCGAC GCCGACACCG CGCAGCTGAT CGCCGAAGAG CTCGGCCACA CCGTCAAGCG CGTTGCCGCG TCGGACGTAG AAGAAGGTCT GTTCGACGTC GTCGACGATT CCACCGATAC CGAGCCGCGT TCGCCGGTCG TGACCGTGAT GGGCCACGTC GACCACGGTA AGACCTCGCT GCTCGACGCG CTGCGCCACG CCAACGTGGT GTCGGGCGAA GCCGGCGGCA TTACCCAGCA CATCGGTGCG TATCAGGTGA CCTCGCCGGA AAGCGGCAAG AAGATCACCT TCATCGACAC CCCCGGCCAC GCCGCGTTCA CCGCGATGCG CGCCCGCGGC GCCAAGGTGA CCGACATCGT GGTGCTGGTG GTCGCCGCCG ACGACGGCGT GATGCCGCAG ACCATCGAGG CGATCAATCA CGCCAAGGCG GCCGGCGTTC CGATCATCGT GGCGATCAAC AAGATCGACA AGCCGGACGC CAAGCCCGAC CGTGTCCGCA CCGACCTGCT GCAGCACAAT GTGCAGGTGG AATCGATGGG CGGCGACGTC GTCGACGTCG AGGTTTCTGC CAAGAACAAG ATCAATCTCG ACAAGCTGCT CGAGATGATC GCGCTGCAGG CCGAAATCCT GGAGCTCAAG ACCAACACCC AGCGCCCGGC CGAAGGCACC GTGATCGAAG CCAAGCTCGA TCGCGGCCGT GGTCCGGTCG CCACCGTGCT GGTTCAGCGC GGCACCCTGC GGGTTGGCGA CATCATCGTG GCTGGCGCCG AGATGGGCCG CGTCCGCGCG CTGATCTCTG ACCAGGGCGA GACCGTGCAG GAAGCCGGCC CGTCGGTCCC GGTCGAAGTG CTCGGCTTCA ACGGTCCGCC GGAAGCGGGC GACCGCCTCG CGGTGGTCGA GAACGAAGCC CGCGCCCGCC AGATCACCGA TTACCGTGCG CACCAGAAGC GCGAGAAGTC CGCAGCCTCG GTTTCCGGCA TGCGCGGCTC GCTCGAGCAG ATGATGACGC AGCTGAAGAC GTCCGGCCGG AAGGAATTCC CGCTCATCGT CAAGGCGGAC GTGCAGGGCT CGCTGGAAGC GATCCTCGGC TCGCTGGAGA AGCTCGGCAC CGACGAAGTC GCCGCGCGCA TCCTCCACGC CGGCGTCGGC GGCATCAGCG AGAGCGACGT GACGCTGGCC GAAGGCTTCA ACGCCGTGAT CCTCGGCTTC TCGGTCCGTG CCAACAAGGA GGCCGCTGCG GCCGCCAAGC GCAACGGCAT CGAGATCCGC TACTACAACA TCATCTACGA CCTGGTGGAT GACATTAAGA AGGCGATGAG CGGCCTGCTC GCGCCGACCC TGCGCGAAAC CATGCTGGGC AACGCGCAGA TCCTGGAGAT CTTCAACATC TCCAAGGTCG GCAAGGTCGC CGGCTGCCGC GTCACCGACG GTACCGTCGA GCGCGGCGCC AATGTCCGCC TGATCCGCGA CAACGTCGTG GTGCACGAAG GAAAGCTGTC GACCTTGAAG CGCTTCAAGG ACGAAGTGAA GGAAGTCGTC GCCGGCCAGG AATGCGGCAT GGCGTTCGAG AACTACACCG ACATGCGGGC AGGCGACATC ATCGAGTGCT ACCGCGTCGA GACCATCCAG CGCTCGCTGT AA
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Protein sequence | MVDTKTPGDK TLTMPTKTLT LKPRVEQGVV RQSFSHGRSK QVVVEKRGKR RLGGDEPAAP AAPEVAKKPA PAPAAPPRQQ QSRPAPQQSR SGMVLRTLTE DERTARATAL ADARVREIEE RKQAEIEAQR RAEQEKIEKA EREAAEARRK AEEERHRQED EAKRKAETEA KKRFGDAEPA KKPAETSTTT TTAAPARPAT TTTRAPTPAG RPPAVAAEAG DDDEAPRMIR RPGGPARPAP PPKQPAAKPG ASKQRGRLTV VTALNADDVR ERSIASFRRR TQRLKGHASN EPKEKLVREV VIPEVIAIQE LANRMSERAV DVIRLLMKQG AMHKITDVID ADTAQLIAEE LGHTVKRVAA SDVEEGLFDV VDDSTDTEPR SPVVTVMGHV DHGKTSLLDA LRHANVVSGE AGGITQHIGA YQVTSPESGK KITFIDTPGH AAFTAMRARG AKVTDIVVLV VAADDGVMPQ TIEAINHAKA AGVPIIVAIN KIDKPDAKPD RVRTDLLQHN VQVESMGGDV VDVEVSAKNK INLDKLLEMI ALQAEILELK TNTQRPAEGT VIEAKLDRGR GPVATVLVQR GTLRVGDIIV AGAEMGRVRA LISDQGETVQ EAGPSVPVEV LGFNGPPEAG DRLAVVENEA RARQITDYRA HQKREKSAAS VSGMRGSLEQ MMTQLKTSGR KEFPLIVKAD VQGSLEAILG SLEKLGTDEV AARILHAGVG GISESDVTLA EGFNAVILGF SVRANKEAAA AAKRNGIEIR YYNIIYDLVD DIKKAMSGLL APTLRETMLG NAQILEIFNI SKVGKVAGCR VTDGTVERGA NVRLIRDNVV VHEGKLSTLK RFKDEVKEVV AGQECGMAFE NYTDMRAGDI IECYRVETIQ RSL
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