| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2558 |
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| Symbol | |
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| ID | 6376256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2730289 |
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| End bp | 2731731 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642685036 |
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| Product | RNA methyltransferase, TrmA family |
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| Protein accession | YP_001960933 |
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| Protein GI | 189501463 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACA ATCTAAGAGA GTTCTACAAC AAGGGAGAGC GTATTGAACT GACGATTTCC
GATATCGCTG AAAAGGATCA GTGTTTCGGG AGGCTGGAAA ACGGTACAGG CGTTCTTGTG
CGGGGTATGC TTGCAATAGG CGACAGGGTA GAGGCGACCA TAACCAAAGT CAGGCCCGCC
TATCTTGAGG CAATCGTCGA CAAGGTGCTG GCAGTATCTG CTGACCGTGT CGAGCCGGTC
TGTCCGGTTT TCGGTGTGTG CGGAGGGTGT AAGTGGATGC ATGTCGGCTA TGACGCGCAG
CTTCGCTACA AGCAGAAAAA AGTGCATGAT GCTCTGGTGC ATATCGGCGG CTTTCAGGAC
ACTGCCGTCA AGCCGGTTCT GCCTGCTCCC GACATCATGC ATTACCGGAA CAAGGTGGAA
TTTTCCTGTT CAAGCAAGCG GTACCTGATG CCGGAAGAGC TGAAGATGGA GCGCCTCGAA
AAATCGAAGG ATTTCGCACT CGGTTTTCAT GCTCCCGGAA ATTTCGAGAA AGTGCTTGAA
ATAGAAGCCT GCTATCTTGC CAAAGAGAGC ATGAACAATG CGCTGACAGT AACCAGGGCG
TTTGCGTTAG AAGAGGGCCT TTCGCCCTAT GCGGCAAGGG AGCATACAGG ATTTTTAAGA
AACCTCATGC TCCGCTACAG TGAGGAGAGG GATGAGCTGA TGGTCAATCT GGTTACTTCC
TCGTATGATT CCGCACTGAT GAAGGCATAT CGTGACCGGC TTCTGGAGGC AATGCCGGGT
CAGAAGATGA CCATCGTCAA CAATGTCACC ACACGGAAAA ACACCGTTGC GGTGGGAGAG
AAAGAGTTTG TCGTTCATGG TGAAGGGGTT ATTCAGGAAC GTCTTGGCGA TCTGCAGTTC
CGCATATCCG CCAATTCGTT TTTTCAGACC AACACAAAAC AGGCGGAAGC CCTCTATGAC
GGCATCATGC AGATGGCCGG GCTGAGGAAG GATGATACGG TCTACGATCT TTACTGCGGA
ACAGGAACCA TTACCCTCTA TCTTGCCGAG CGCTGCCGAC AGGCTGTAGG GCTTGAAATC
GTCGAGAGCT CTCTTTCTGA CGCGGCAGAA AACGCATCAC GAAACGGCAT CGCCAACGCT
TCATTTTACA GGGTCGATCT TAAGGATTTT CATACGCTTC TCGGCACCCT CGAGGAGTTC
GGCTTTCCGA GGGTGATCGT CACCGACCCG CCGAGGGCGG GCATGCACCC TAAGGCGCTG
AAAACCATGG TGCGGCTTCA GCCCGAAACC ATCGTCTATG TCAGCTGTAA TCCGGCCAAC
CTCGCACGCG ACGGCAAGGA GATCTGCGCC GCCAATTACC GTTTGGAAGA GGTTCAGCCG
GTAGACATGT TTCCGCATAC CAGTCATATC GAGACGCTCG CGTGCTTCAA ACGTCAAGTA
TAA
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| Protein sequence | MENNLREFYN KGERIELTIS DIAEKDQCFG RLENGTGVLV RGMLAIGDRV EATITKVRPA
YLEAIVDKVL AVSADRVEPV CPVFGVCGGC KWMHVGYDAQ LRYKQKKVHD ALVHIGGFQD
TAVKPVLPAP DIMHYRNKVE FSCSSKRYLM PEELKMERLE KSKDFALGFH APGNFEKVLE
IEACYLAKES MNNALTVTRA FALEEGLSPY AAREHTGFLR NLMLRYSEER DELMVNLVTS
SYDSALMKAY RDRLLEAMPG QKMTIVNNVT TRKNTVAVGE KEFVVHGEGV IQERLGDLQF
RISANSFFQT NTKQAEALYD GIMQMAGLRK DDTVYDLYCG TGTITLYLAE RCRQAVGLEI
VESSLSDAAE NASRNGIANA SFYRVDLKDF HTLLGTLEEF GFPRVIVTDP PRAGMHPKAL
KTMVRLQPET IVYVSCNPAN LARDGKEICA ANYRLEEVQP VDMFPHTSHI ETLACFKRQV
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