Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2508 |
Symbol | |
ID | 6376206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2677022 |
End bp | 2677810 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642684986 |
Product | Peptidase M23 |
Protein accession | YP_001960883 |
Protein GI | 189501413 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.290158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGTCCC GCCATAAAAG ACATGCACGG CACACCCTCA GCTTTGTATC TTCGGAAGGA CTGTCTCGCC CGTTTATCGT TTTGAAAGGA AATACCTTTG TTTTTGCGCT TGTTGGAGCG CTGATCGTTA TTTTCCCGGC TGTTCTTACA GGGGTGCTGC TCGTTAATAC TTCCCTGTTG TCTTTTTTGC ATGGCGGGGT GCTCTCTCCA CAGGAAAGGC AGCTCCTTTT TGATCAGTCT GAAAGGCTTG ACAGCCTGGT GCTTGAGATT GAGAGAATGG ATTCTCTCTC TGAAAAGATG GAAGCAACTG TACTGAAGGA GCAGTCAGTG TTAAAAATGC TTGACAGACC AAGTGCTTCC GTTGATGACG TGTTTGCTCC AGGCCTGCTT CCGGATAACA TCGCTGCCCG GCCAGACAAA GACCCGGTCT ATATTGGAAG GCTTGTCAGT GGTACTCTTT CGCAACGGTT CCAGCCGAGT AACAGTCATT ACGGGATTGA TATAGCAACG CCAGTCAATG AGCCTGTGAG CGCGTTATCC GACGGCTCGG TGATTTTTTC CGGATGGACA ACCGATTTCG GCTATACCCT GATTCTTGAT CACGGCACAT ACAAGACATT TTACAAACAT TGTAGCCGGC TGTTTAAGAG ATCCCATGAA CAGGTAAAAC TTGGAGAAAT TATTGCGCTT TCTGGTAATA CGGGCAAATT TTCTACAGGG ACTCATTTGC ATTTTGAAAT CTGGAGGAAC GGTATCCCGG TGAATCCGGA ATTATACCTG AGGAAGTAG
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Protein sequence | MRSRHKRHAR HTLSFVSSEG LSRPFIVLKG NTFVFALVGA LIVIFPAVLT GVLLVNTSLL SFLHGGVLSP QERQLLFDQS ERLDSLVLEI ERMDSLSEKM EATVLKEQSV LKMLDRPSAS VDDVFAPGLL PDNIAARPDK DPVYIGRLVS GTLSQRFQPS NSHYGIDIAT PVNEPVSALS DGSVIFSGWT TDFGYTLILD HGTYKTFYKH CSRLFKRSHE QVKLGEIIAL SGNTGKFSTG THLHFEIWRN GIPVNPELYL RK
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