Gene Cphamn1_2485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2485 
Symbol 
ID6376181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2652043 
End bp2653065 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content50% 
IMG OID642684962 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001960860 
Protein GI189501390 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0895292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA AAAGAATTTT AAGCGGCATG CGCCCTACCG GCAAGCTGCA TCTGGGCCAC 
TTTACCGGCG CTCTTGAAAA CTGGGTCGCC CGGCAAAACG AGCTGGATGC TGACGGCCAG
AGAGCTTTCG AGACATTTTT TCTTATCGCC GATTACCATA ATCTCACCAC TTCGCTCGAA
ACATCAGATA TCTTCGACTG TACCATCGAT ATGGCTACAG ACTGGCTCGC GGCTGGTGTC
GATCCGGAAA AAAGCCCGAT CTTTCGCCAG TCCAGGGTGA AAGAACATAC AGAACTGTTC
CTTATCTACT CGATGCTTAT CACCGCGTCG AGACTTGAGC GAAACCCTAC ACTCAAGGAC
CAGTTGAGAG ACCTCAATAT GGACGCCGTT TCCTACGGTC ATCTCGGTTA TCCTGTTCTT
CAGGCCGCCG ATATACTGCT CTACAAGGGA AATATCGTTC CGGTCGGGGA AGATCAGCTG
CCTCATGTTG AAATAACCAG AGAAATAGCC AGGCGCTTCA ACAACCAGTA TCAGCACCCC
GTCTTCGGCG ACGTATTTGA GGAACCCGAA CCGAAAATCA CGAAGTTTTC GCGACTTGCA
GGTCTGGACG GCAAAACGAA AATGTCGAAA TCACTGGGAA ACACCATTCT TCTCTCCGAT
AAGCCAGAGG AGGTTTTCAA TAAACTGCGT AAAGCGGTTA CCGATACACA GAAAATCAGA
AAAAACGATC CGGGACGACC GGAAGTCTGT ACGGTTTTCA GTTACCACCG CAGATTTTCA
GACCCTGACT CGGTTGAATC GATAGCACGT GACTGCAGAT CAGGCGCTCT GGGTTGTGTC
GACTGCAAAA AAGCATGCGC TGAAGCAATC TCCGGAGAAC TTGCCCCGAT CCTTGAGAAA
AGATCAGGCT ATGCTTCCCG ACCAGAGATG GTAAAAGACA TTCTGCTCAG CGGTGAGGAG
CATGCCCGCC GCATCGCTGA AACAACCATG CAGGAAGTAC GGATCGCCAT GAACATCGGC
TGA
 
Protein sequence
MSKKRILSGM RPTGKLHLGH FTGALENWVA RQNELDADGQ RAFETFFLIA DYHNLTTSLE 
TSDIFDCTID MATDWLAAGV DPEKSPIFRQ SRVKEHTELF LIYSMLITAS RLERNPTLKD
QLRDLNMDAV SYGHLGYPVL QAADILLYKG NIVPVGEDQL PHVEITREIA RRFNNQYQHP
VFGDVFEEPE PKITKFSRLA GLDGKTKMSK SLGNTILLSD KPEEVFNKLR KAVTDTQKIR
KNDPGRPEVC TVFSYHRRFS DPDSVESIAR DCRSGALGCV DCKKACAEAI SGELAPILEK
RSGYASRPEM VKDILLSGEE HARRIAETTM QEVRIAMNIG