Gene Cphamn1_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2479 
Symbol 
ID6376174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2646154 
End bp2647350 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content53% 
IMG OID642684956 
Productprotein of unknown function DUF323 
Protein accessionYP_001960854 
Protein GI189501384 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATA TTTTTATCAG TTACGCCCGT GAGGATGAGC GTCGGGTAAA GCCTATCGTG 
CAGCATCTCC AGCAAATGGG TTGGCGAGTA TTCTGGGATC GGAATATTCC GCCGGGTCAG
AGCTGGGATG AATACATAGA GCAACATCTG GAGGCTTCAT GCTGTGTGGT GGTCGTCTGG
TCGAAGCATT CTGTGGGCTC CCGATGGGTG AAGGCAGAAG CCGAAGAGGC AAAAAACAGG
AATATTCTTG TGCCCCTGTT ACTTGACAAG GTAAAACTCA GTCTGGGATT CAGGTACATC
CAGGCAGCCG ACCTGACCTC ATGGAACCAT GATGATATAA CCCATCCCCA ATTCAGGGCA
TGTATCGATG CTATTGCCTG TATGGTGCCG CAGTCAGGGC CGTTAGAGCC GGCTTCTCCG
GATGTGCTCG TTACTCCGGT TGAGCCTCCT GCTTCCAGGC CGCAGCTTCC GGAAAACTTT
GTTTTGATCC GGGGCGGACA GTTCAGCATG GGCAGCCCTG AAGACGAATA CGGTCATCAG
GATAATGAAT CCCTGCATGA GGTGAAAGTG AGTGACTTTG CGATCTGTCG GTATACGGTG
ACGGTCGGAG AGTATCTCGA ATTTACCGAA GAGGTGAAGA TCAATTATGA CGGTGGCACT
GAGGGCGATC GTTATCCTCT GGTCAATGTT TCGTGGAATG ATGCAGTCGC CTATTGCCGG
TGGTTATCCG AAAAGCGGGG CGAGCTTTTC CGGTTGCCGA CAGAGGCAGA GTGGGAGTAT
GCTTGCCGTG CTGGTACCAG AACTCCTTTC AGCACAGGAG AGAACCTGAC CACCTATGAG
GCAAACTATG ACGGGAACTA TCCCTACCGG AACAATCCCA AGGGAATGTA TCGTAAAAAA
ACAGTGCCAG TGGACAGCTT CAAACCCAAC AGTTACGGGT TGTACAACAT GCACGGCAAT
GTATGGGAGT GGTGCGGTGA CAGGTATGGG GCTGGATACT ATGAGGAGTG CCGAAAGCAG
GGGATAATGG AGAATCCGCA AGGGGCAGAA AAGGGTTCGA ACAGTGTTCT TCGTGGTGGT
GGCTGGCTCA CCTATGCGCA GCATTGCCGG TCGGCTTATC GCCACTTCGA CGGCCCCGTC
TATCGCAGCA ACTACGTGGG CTTCCGCCTT GTGTTCGTCC CGCAGTTCAA AGGGTAG
 
Protein sequence
MSDIFISYAR EDERRVKPIV QHLQQMGWRV FWDRNIPPGQ SWDEYIEQHL EASCCVVVVW 
SKHSVGSRWV KAEAEEAKNR NILVPLLLDK VKLSLGFRYI QAADLTSWNH DDITHPQFRA
CIDAIACMVP QSGPLEPASP DVLVTPVEPP ASRPQLPENF VLIRGGQFSM GSPEDEYGHQ
DNESLHEVKV SDFAICRYTV TVGEYLEFTE EVKINYDGGT EGDRYPLVNV SWNDAVAYCR
WLSEKRGELF RLPTEAEWEY ACRAGTRTPF STGENLTTYE ANYDGNYPYR NNPKGMYRKK
TVPVDSFKPN SYGLYNMHGN VWEWCGDRYG AGYYEECRKQ GIMENPQGAE KGSNSVLRGG
GWLTYAQHCR SAYRHFDGPV YRSNYVGFRL VFVPQFKG