Gene Cphamn1_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2012 
Symboltsf 
ID6375705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2165611 
End bp2166477 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content49% 
IMG OID642684503 
Productelongation factor Ts 
Protein accessionYP_001960403 
Protein GI189500933 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.895136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA TATCCGCAAA AGCAGTAAAA GAATTACGAG ATAAAACCGG CGTTGGTATG 
ATGGACTGTA AAAAAGCCCT GGATGAAAGC GGGGGTGATA TGCAGAAAGC CGTTGAATAC
CTGCGTAAGA AAGGCGCTGC GCTTGCAGCC AAACGAGCAG AGCGTGAAGC CAGTGAGGGT
GTTGTGATCG TCAAAATCAA CGATGCCGCA GATACGGGAA TTATTCTGGA ACTGAACTGT
GAAACCGACT TCGTGGCACG AGGCGACGAT TTTACCGGTT TTGCCGATAC CATCGCTCAA
ACCGCACTTG ACGGCAGTGT CGATTCGGCA GAGAAGATGA TGGGCGTTTC TCTTGGTGAG
GCCTACGACG GTGAAAAGGT CGAAGACGCT ATCAAGACCA TGACAGGAAA ACTCGGTGAA
AAGATACAGC TCAAAAGACT GGCCTATGTC AGGTCGGAAG GTGGTCTTGT CGCCGGTTAT
GTGCATCCCG GATCAAAGCT CGGCTCCATA GTTGAGTTGT CAGGAGGCAA CTCGGCAGAG
GCGGTTGTTC TGGCAAAGGA CATTGCCATG CAGGTCGCTG CCGCGACACC TATTGTTGTA
GACCGCTCCA GCGTTCCAGC CGAGTATATT GAAAAAGAAA AAGAGATCTA TCGGCAGCAG
GCTCTTGCCC AGGGAAAGCC TGAAAAATTT GTCGACAAGA TCATTACAGG TCGTTTGGAA
AAATACTTCC AGGAGGAGGT GCTGCTTGAA CAGGCCTATA TCAAGGATAG CAACACCAAA
GTATCGGATG TGCTGCATGA GTTCACGAAG CAGTATGATA TGCCGATAAC GGTTAACAGT
TTCATTAGAT ATCAGTTAGG AGCGTAA
 
Protein sequence
MSQISAKAVK ELRDKTGVGM MDCKKALDES GGDMQKAVEY LRKKGAALAA KRAEREASEG 
VVIVKINDAA DTGIILELNC ETDFVARGDD FTGFADTIAQ TALDGSVDSA EKMMGVSLGE
AYDGEKVEDA IKTMTGKLGE KIQLKRLAYV RSEGGLVAGY VHPGSKLGSI VELSGGNSAE
AVVLAKDIAM QVAAATPIVV DRSSVPAEYI EKEKEIYRQQ ALAQGKPEKF VDKIITGRLE
KYFQEEVLLE QAYIKDSNTK VSDVLHEFTK QYDMPITVNS FIRYQLGA