Gene Cphamn1_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1727 
Symbol 
ID6375414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1871679 
End bp1872722 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content52% 
IMG OID642684220 
ProductAgmatine deiminase 
Protein accessionYP_001960126 
Protein GI189500656 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2957] Peptidylarginine deiminase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCGG AAAGCTACAC TATGCCGCCC GAGTGGGCAC CTCATGATGC CACATGGCTC 
TCATGGCCTC ATAAAGAAGC CTCATGGCCC GGTAAATTCG GCCCTGTACC CGACGTTTTT
GCTCGAATCG CAGCGCACCT CTGCCGTTTT GAAAGGGTGC ATATCAACGT TCTCGGGCCG
GAAATGGAGT ATGATGCCCG AGAGCGGATC AGGCGGTTTG TGAAGGAAGC CTCGTGCATG
CAAAACATTG TTTTCCACCC GATTCCAACG GACGACGCAT GGTGCCGTGA TCATGGGCCG
AACTACGTGT TCAGACGCAC GGAAGAAGGG TTGGAAAAAG TTATTCTGAA CTGGAAATTC
AATGCATGGG GGGGAAAGTA TGAGCCCTAT GACAGCGACG CAGCGGTTGC TGAAAGGGTT
GCCGCAGAGC AGGGAGTCAG GCTGGTTGCA ACGGATATGG TGCTGGAAGG GGGGGCTATC
GATGTGAACG GTAAGGGGTT GCTTCTGACA ACAGAGGCGT GTCTGCTCAA TCCCAACCGC
AATCCGGACA TGGTAAAGGA AGATATCGAG AACGTGCTCA AATACTATCT CGGAGTAGAG
AAAATTCTCT GGCTGAAAGA TGGTATCGCG GGTGACGATA CCGACGGGCA CGTTGATGAT
ATGGCGCGTT TTGTTGATGA AAGAACGGTT GTCATTACCG TTGAAGAAAA TCCGGAAGAT
GAAAATCATG CGGTATTGCT GGAGAATTAC CGGCGGCTTA AGCAGTATAC AGATCTTGAA
GACAAACCCT TGCGGATTGT GACACTGCCG ATGCCGGATG CGGTGTATTA TGAAAATGAA
AGGCTGCCGG CCAGCTATGC AAACTTCTAT ATCGCCAACA ACCAGGTGCT TGTTCCGGTT
TACGGTTGTG ATAAAGACCG GGTTGCTCTC GATATCCTTG CCCGATGCTT TCCGTCACGG
GAGGTGACGG GAATTGATTG CACCGATCTT GTCTGGGGAC TTGGCGCCAT TCACTGTGTG
ACCCATGAAG AACCTTCTCT GTGA
 
Protein sequence
MRPESYTMPP EWAPHDATWL SWPHKEASWP GKFGPVPDVF ARIAAHLCRF ERVHINVLGP 
EMEYDARERI RRFVKEASCM QNIVFHPIPT DDAWCRDHGP NYVFRRTEEG LEKVILNWKF
NAWGGKYEPY DSDAAVAERV AAEQGVRLVA TDMVLEGGAI DVNGKGLLLT TEACLLNPNR
NPDMVKEDIE NVLKYYLGVE KILWLKDGIA GDDTDGHVDD MARFVDERTV VITVEENPED
ENHAVLLENY RRLKQYTDLE DKPLRIVTLP MPDAVYYENE RLPASYANFY IANNQVLVPV
YGCDKDRVAL DILARCFPSR EVTGIDCTDL VWGLGAIHCV THEEPSL