Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0003 |
Symbol | |
ID | 6373645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 2914 |
End bp | 4005 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642682524 |
Product | DNA replication and repair protein RecF |
Protein accession | YP_001958473 |
Protein GI | 189499003 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGATTAC AGGAAATACA ACTTGTCAAT TTCAGAAAGC ATAAGGAGCT TGTATTTGCT CCGTCAGAAG CGATTACTGT TGTCTATGGG CCGAACGGTT CAGGTAAAAC AAATATACTT GAGGCGGTTC ACTACTGTAC GCTTGCAAGA GGATTGAACA GGTCACTCGA CAGGGAGTGC CTCAATTTTG ATGCAGGTTA CTTTCTGCTA CAAGGTACTT TTGCTGATGA TAGAGGTATT GAGCTTTCTG TCAAGGTCAG TTACGAAAAA AACGTTGAGA AAAAAATATT TATCAACAGT GATGAGCTGA AAAAATATTC TCAACTTATC GGGCGTATTC CATGTGTTAC CTTTTCTCCC ATGGAGCTTT CTTTGGTAAA CGGATCTCCA CAGGAGCGAA GACGGTTTAT GGATAACGCT CTTTCCCAGA CCAATAAAAG TTATCTCGAT GATCTGCTGC AGTACAGAAG AGTATTGCAA CAGCGTAATA CGCTGCTTGG TGCAGTCAAC GAAAAGGGAA TGGACAGGGA TAGCCTGGAG GTATGGACTG AAAAGCTCAC GCAACTTGCC TGTTCGATCG TCTCGGAAAG ACTTGCCTTT ATCGAACGAT TGTTTGTTTA CATAGAGCCT GTCTATGAAC AGCTTGGTCT CGGGGAAGTT CCAGGTATAT CCTATCGCTC CGCTGCAGGA AGACACGCAA ACGAAATCGC GCCTGAAGAA CTTTTTTCCT TCATGATGCA ACGATTTCGT GAGATAGAGC ATCAGGAAAT ATTCCGGAAA CAGTCGCTTG CAGGACCTCA CAGAGACGAT CTTGTGTTCA GGTTCAATGA TACTGATGTG AAAAAATATG CCTCACAGGG GCAGTTGAGG ACGTTTCTCA TTGCCGTAAA GCTCGCTTTA CATACACTTG TCAGCGATAC TACAGGAGAA CGCCCTTTAT TTCTCCTTGA TGATCTGTTC AGCGAGCTTG ACGGAACAAG GATTGAAAAA ATTCTGGAAC AGCTTGAAGG AGCCGGTCAA TCGATTATCA CGGCGACGGA TAGAAAAGAT GGCTCAGGTG TTCGCTCTGT CTCCATAGAA GATCTTTTGT AA
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Protein sequence | MRLQEIQLVN FRKHKELVFA PSEAITVVYG PNGSGKTNIL EAVHYCTLAR GLNRSLDREC LNFDAGYFLL QGTFADDRGI ELSVKVSYEK NVEKKIFINS DELKKYSQLI GRIPCVTFSP MELSLVNGSP QERRRFMDNA LSQTNKSYLD DLLQYRRVLQ QRNTLLGAVN EKGMDRDSLE VWTEKLTQLA CSIVSERLAF IERLFVYIEP VYEQLGLGEV PGISYRSAAG RHANEIAPEE LFSFMMQRFR EIEHQEIFRK QSLAGPHRDD LVFRFNDTDV KKYASQGQLR TFLIAVKLAL HTLVSDTTGE RPLFLLDDLF SELDGTRIEK ILEQLEGAGQ SIITATDRKD GSGVRSVSIE DLL
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