Gene Cphamn1_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0003 
Symbol 
ID6373645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2914 
End bp4005 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content44% 
IMG OID642682524 
ProductDNA replication and repair protein RecF 
Protein accessionYP_001958473 
Protein GI189499003 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGATTAC AGGAAATACA ACTTGTCAAT TTCAGAAAGC ATAAGGAGCT TGTATTTGCT 
CCGTCAGAAG CGATTACTGT TGTCTATGGG CCGAACGGTT CAGGTAAAAC AAATATACTT
GAGGCGGTTC ACTACTGTAC GCTTGCAAGA GGATTGAACA GGTCACTCGA CAGGGAGTGC
CTCAATTTTG ATGCAGGTTA CTTTCTGCTA CAAGGTACTT TTGCTGATGA TAGAGGTATT
GAGCTTTCTG TCAAGGTCAG TTACGAAAAA AACGTTGAGA AAAAAATATT TATCAACAGT
GATGAGCTGA AAAAATATTC TCAACTTATC GGGCGTATTC CATGTGTTAC CTTTTCTCCC
ATGGAGCTTT CTTTGGTAAA CGGATCTCCA CAGGAGCGAA GACGGTTTAT GGATAACGCT
CTTTCCCAGA CCAATAAAAG TTATCTCGAT GATCTGCTGC AGTACAGAAG AGTATTGCAA
CAGCGTAATA CGCTGCTTGG TGCAGTCAAC GAAAAGGGAA TGGACAGGGA TAGCCTGGAG
GTATGGACTG AAAAGCTCAC GCAACTTGCC TGTTCGATCG TCTCGGAAAG ACTTGCCTTT
ATCGAACGAT TGTTTGTTTA CATAGAGCCT GTCTATGAAC AGCTTGGTCT CGGGGAAGTT
CCAGGTATAT CCTATCGCTC CGCTGCAGGA AGACACGCAA ACGAAATCGC GCCTGAAGAA
CTTTTTTCCT TCATGATGCA ACGATTTCGT GAGATAGAGC ATCAGGAAAT ATTCCGGAAA
CAGTCGCTTG CAGGACCTCA CAGAGACGAT CTTGTGTTCA GGTTCAATGA TACTGATGTG
AAAAAATATG CCTCACAGGG GCAGTTGAGG ACGTTTCTCA TTGCCGTAAA GCTCGCTTTA
CATACACTTG TCAGCGATAC TACAGGAGAA CGCCCTTTAT TTCTCCTTGA TGATCTGTTC
AGCGAGCTTG ACGGAACAAG GATTGAAAAA ATTCTGGAAC AGCTTGAAGG AGCCGGTCAA
TCGATTATCA CGGCGACGGA TAGAAAAGAT GGCTCAGGTG TTCGCTCTGT CTCCATAGAA
GATCTTTTGT AA
 
Protein sequence
MRLQEIQLVN FRKHKELVFA PSEAITVVYG PNGSGKTNIL EAVHYCTLAR GLNRSLDREC 
LNFDAGYFLL QGTFADDRGI ELSVKVSYEK NVEKKIFINS DELKKYSQLI GRIPCVTFSP
MELSLVNGSP QERRRFMDNA LSQTNKSYLD DLLQYRRVLQ QRNTLLGAVN EKGMDRDSLE
VWTEKLTQLA CSIVSERLAF IERLFVYIEP VYEQLGLGEV PGISYRSAAG RHANEIAPEE
LFSFMMQRFR EIEHQEIFRK QSLAGPHRDD LVFRFNDTDV KKYASQGQLR TFLIAVKLAL
HTLVSDTTGE RPLFLLDDLF SELDGTRIEK ILEQLEGAGQ SIITATDRKD GSGVRSVSIE
DLL