| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1544 |
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| Symbol | |
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| ID | 6364359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 1835373 |
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| End bp | 1837505 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642680735 |
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| Product | putative beta-xylosidase |
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| Protein accession | YP_001955487 |
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| Protein GI | 189440406 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3940] Predicted beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.099307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACT CCTACTCACT GCTGTGCTAT ACGCGTGTCC CCACGTCGCG CGAAGAGGCG
AACAACGAGG ACATCGCCTT CAGCATGCAC CTGGCGCTGC GGTCGCATCT CGACGGCTCG
TGGACGCCGC TTAACGAAAA CTACGGCATC TTCTTCGCTG CCGGCGTGCC GATCGCCGCG
GCGACGCCCG AATCCCGACG TGCGTGCACC GCGGCGGCAC GATTCAAGAC CGATCCGTAC
ACGACGGTGC GAGCCGCCAG CGACGCCGTC GCGCACGGCG CGGCGATGCC CGGCGTGGAC
ATCGAACTCA AAAGCCTCAA GGATCCGTAC CTGTTCCGGC TGGCGTCCGG CCGGTTCGCC
GTGGCGGCGA CCCGCACCGC GCGCGGCGGC GGCGCGGACG GATCCGAACG GTCGGCGTTC
CTGCTGGCGA CCAGCCGCGA CCTGACGTCG TACGATCAGC GCGGACTGGT GCTGCTTGGC
CCCACGTCCG GCGTACACCG TCCCACGGTC ATATACAACG ATGCAGAACG TCGGTACGTC
ATCCGGTGGC ATGACGACGA CGGCCACGCG ATGCGCGCGG TCTGCGCCGA CATCATCGCC
GCGGTCGGCA CCACGCTGCC GGCCGAACCG GACGATACCG CCGAACCGAT TGCCGCAAGC
AATGCCAACG ATGTCAACGC AACGTCCGTC CGTCGCGACT ACGGCATCGC GGACGCCGTC
CCCGGCAACG AAATCGACAT CACCGAACAG GAAGCCGCGA CGCTCATCGC ACGCTTCGGC
CGCGTTTACA ACACCGGCGT CACCGTGCCG TCCATGACCG TCTCGGCCGA TCTGTACGAC
GGCGAAGCCC GTGACCTCAT CGGCTCGCTC GGCCGCACCA CGGCCAAACT GCAGTACTCC
GACGGATCCA CCGCCATGCG CGCCGTCGAC TGGGACGCCG CACAGCTCGC CGCCCTCGCC
GACGACGCCG CAGCTGGCAG GCTCAAGCCG GGCGAACGCC GTACGGTCCG CGGTCGCATC
CGCCAGACCG ACTATCCCGT GCCGTTCGCC GTCGAACGCG CCGATCCGTC CGTGTTCGCA
TGGAATTACA ACGGTGAACA ACTCTTCATG TTCATTGCCA CCGACGATAC CGACGGCAAC
TGCGTCGATC CGAACGGCGG CCGCACGCAC ATGCCGCTGC GCGTGGCGAC GTCCATCGCC
GACCTGTCGG ATGCCGCCGG CGGCCGCGAC CGCGAAATCG ACCTGCTCAC CCGCGGCGAC
CGCAACAGCG AAGGCCGCGC GATGACCGGC TGCTTCTGGG CGCCCGAGCT GCACGTGATC
GGCGGCAAGC TGTCCGTGCT GTTCATGCCG TGCTTCGACG GCCCCGCCGC CGATCCGGAC
GGCACCGCGA ACGACCGCGC CGGCAAACCC GACATGTGGA CCGGTCGCTG CCATATCATG
CAGCTCAGGC AGGATGCCGA CGGCCGTGAC CTCGACCCGC GCGACCCCGC CAACTGGACC
GTTCCCGAGC CGATCCTCGG CCCCGGCGAA CGGATCCTCA ACCCGGTGCA GCGCATCTCG
CTCGACATGA CCGTGATCGT CGACTCCGGC CGCTGGTACT ACGCGTGGCA GCAGGTCGGC
AGCGTATGGA TCGCGCCGTT CGACCCGGAC CGGCCGACGC GGCTGACCGG CGAGCCGACG
CAGATCGTCG TGCCGGAATT CGCGTGGGAC AACATGATCG CCGAAGGGCC GAACGCATTC
GTGCATGAGG GAAAGATCTT CCTGATCTAC TCCGGATCGC TCGTCGGCAT CGACTACACG
ACCGGACTGG TCACCGCGCC GGCCGGCGTG CGCGCCGACC TGACCGACCC GGCCACGTGG
ACGAAACTCG ACTACCCGCT GCAGAAATCC GGCATGTACA ACGGTGAATG GCAGCTGGGC
ACCGGCCACG GCATGTGGTC GCACGACGAG GGTGGCAACC TGATCTACGT ATTCCACAAC
GCGGAGTACG ACAACGGGCG ATACGGCGGG CGTGACGCGC AGGTACGGCG CGTCCACTGG
TCGGGCGAGG GCATGCCGAT CCTCGACATG CAGCGCGACG AGGAACTCAA TCCTGCTTAT
GCTGGGGTAA CGATGGAAAT CGCCGTGCGG TAA
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| Protein sequence | MSDSYSLLCY TRVPTSREEA NNEDIAFSMH LALRSHLDGS WTPLNENYGI FFAAGVPIAA
ATPESRRACT AAARFKTDPY TTVRAASDAV AHGAAMPGVD IELKSLKDPY LFRLASGRFA
VAATRTARGG GADGSERSAF LLATSRDLTS YDQRGLVLLG PTSGVHRPTV IYNDAERRYV
IRWHDDDGHA MRAVCADIIA AVGTTLPAEP DDTAEPIAAS NANDVNATSV RRDYGIADAV
PGNEIDITEQ EAATLIARFG RVYNTGVTVP SMTVSADLYD GEARDLIGSL GRTTAKLQYS
DGSTAMRAVD WDAAQLAALA DDAAAGRLKP GERRTVRGRI RQTDYPVPFA VERADPSVFA
WNYNGEQLFM FIATDDTDGN CVDPNGGRTH MPLRVATSIA DLSDAAGGRD REIDLLTRGD
RNSEGRAMTG CFWAPELHVI GGKLSVLFMP CFDGPAADPD GTANDRAGKP DMWTGRCHIM
QLRQDADGRD LDPRDPANWT VPEPILGPGE RILNPVQRIS LDMTVIVDSG RWYYAWQQVG
SVWIAPFDPD RPTRLTGEPT QIVVPEFAWD NMIAEGPNAF VHEGKIFLIY SGSLVGIDYT
TGLVTAPAGV RADLTDPATW TKLDYPLQKS GMYNGEWQLG TGHGMWSHDE GGNLIYVFHN
AEYDNGRYGG RDAQVRRVHW SGEGMPILDM QRDEELNPAY AGVTMEIAVR
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