Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0892 |
Symbol | |
ID | 6362875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 1024332 |
End bp | 1025087 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642680059 |
Product | SalX-type ABC antimicrobial peptide transport system ATPase |
Protein accession | YP_001954836 |
Protein GI | 189439755 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCACGAG CAATCATCGA GGTAAGAAAC CTACGCAAGG AATACCCCGT CGAGGATGAG ACGGTGGTGG CGCTTGACCG TGTCAATCTC AGTATCCCGC AAGGCCAGAT CTGCTGCATT TTCGGCGAAT CCGGCTCCGG CAAATCCACG CTGCTCAACC AGTTGGCCGG CATGGAAAAA CCGACGCGCG GCGGCGTGAG AATCGGCGGC GTACCCGTCA GCAAACTCGA CGAGCGTGAG CTGGCGGCCT TCCGCCAGAA GCATCTTGGC TTCGTATTCC AGTCGTACAA CCTGCTGCCC AATCTGACCG CGCTCGAAAA CGTGGCAATG CCGCTGATGT TCCGCGGCGT GCCCAAGGAA CAGCGCGAAC GTGCGGCGCG TGGCGTACTC AAACGAGTCG GGCTCGGCCA TCGTCTCAGC CATTACCCGC GCCAGATGTC GGGAGGCCAA CAGCAGCGCG TCGGCATCGC CCGGGCGTTT GTGACCAAGC CCGAGGTGGT GTTCGCCGAT GAGCCGACCG GCAACCTTGA CTCTAAAACC AAAACCGAGG TCATGACGAT GATCTGCGCA TTCGCCCATG ACTTCAACCA GACCATCGTG CTGGTCACAC ACGATCCGCA GATGGCTTCA TACGCCGACC GCATCGTCAC CTTGCTCGAT GGCCGCATCA CCAGCGATCG GCTCAACACC GACCTTTCCC GCCCAACTGT TCCGTCCACG CCGTCCGCCC AAAGAACCCA AGGAGTTGAC CGATGA
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Protein sequence | MPRAIIEVRN LRKEYPVEDE TVVALDRVNL SIPQGQICCI FGESGSGKST LLNQLAGMEK PTRGGVRIGG VPVSKLDERE LAAFRQKHLG FVFQSYNLLP NLTALENVAM PLMFRGVPKE QRERAARGVL KRVGLGHRLS HYPRQMSGGQ QQRVGIARAF VTKPEVVFAD EPTGNLDSKT KTEVMTMICA FAHDFNQTIV LVTHDPQMAS YADRIVTLLD GRITSDRLNT DLSRPTVPST PSAQRTQGVD R
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