| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0192 |
|---|
| Symbol | |
|---|
| ID | 6363229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 243496 |
|---|
| End bp | 244887 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642679339 |
|---|
| Product | MalE-type ABC sugar transport system periplasmic component |
|---|
| Protein accession | YP_001954136 |
|---|
| Protein GI | 189439055 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.245721 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTCGC CAACGGAATT CAGCCTCCCC GTGAGCGCTC AACATGAACC GGTCGGCAAT
GACCGCGTTC CCACCATACG TTTCGAAGAA CAAACCAAAT ATATCAAAGG AGAAAACACC
ATGAAAGGCA CATTCAAGAA GGCGGTCGCA TTGGGCTCTG CCATTGCCCT TGTGGGCGGA
CTCGCCGCTT GCGGATCCAG CTCGGGCGAC GGCACCGCCG AACTGAAGTT CCAGACATGG
AATCTGAAGA ACGAGAAGTT CACCGACTAC TTCGAGGGAC TGATCGACCA GTTCGAGAAG
GAGAACCCCG GTATCACGAT CAAGTGGGTC GACCAGCCAG CCGACAACTA CGAGGACAAA
CTGTCCACCG ACGCCGCTGC GGGAGAACTG CCGGACGTGG TCGATATGGG CCCTGAACCG
GCATATACGC TGGCCAGTGC GGGCATCCTG CTCAATCTCG CCGATGCCGT GCCGGAAGCC
GAAGATGACT TCCTCCCAGC CGCCTGGGAC GCCGCCACAC TCAAGGGAAC CGACCTTGAG
GAAGGCACCT ACGGGTTCCC CTGGTACCTC AACTCCGGCC CCACCTTCTA TAACAAAGCG
GTGCTTGAGG AGTGCGGCAT CACCGTGGAT CCGAACGACC CGCCGACCAA GCAGGACGAC
ATCTTCGCGA TGGCCGACAC CTTCGGCTCC AACTGCGGTG GCAAGTATGC ACTGACCTCC
GGCATCCCAT CCATCCAGGA CTTCGGCATG TATGGCGTGG AACTGATGAA CAAAGACCAC
ACCGAGTTCA CGTTCAACAA CGCGAAAGGC GTAGAATTCG TCCAGCACTA CATCGACATG
TACAACGCCG GCGCCTTCAC CGATGACATG CTCAACAGCT CCACCTCGGG TGAGTCCAAG
AGCTTCAACG GTGGAACCCA GGCGTTTATG AACGGCAACG CCTACAGTGT GGACGATATT
CGCAAGAACG CCCCGAAGGT GTTCGAGAAT CTGGCGATCA CCGATTTCAT CGCCAACACC
AAGCCGAACA TGTTCATGGA GATGCTTACG GTCAATGCCA CAAGCAAGCA CCAGGAGGAG
GCTATCAAGT TCGCCCGATT CGTGACCAAC TCAGACAACC AGCTGGCATT CGACAAGAAG
GCGAACGTGT TCCCGTCTTC GAAGGGTACC ATTGACGACA AATTCTTCAA CCCGTCCGAC
GATACCATGG ACGCCGAAGC CATGCGTATG TCCGCCGATC AGATTCGCAA CGGTGAGATT
TGGGGCCCGG CCCAGTTCAC CTCCGCCTGC TCCACCATGC TGCGTGAGGA AATCGCTCAA
GCGCTGCAAG GCAAGATCAC GGCCAAGGAA GCGCTTGACG CCACCGTCAA GTACTGCAAC
GAACGGCTCT AA
|
|---|
| Protein sequence | MRSPTEFSLP VSAQHEPVGN DRVPTIRFEE QTKYIKGENT MKGTFKKAVA LGSAIALVGG
LAACGSSSGD GTAELKFQTW NLKNEKFTDY FEGLIDQFEK ENPGITIKWV DQPADNYEDK
LSTDAAAGEL PDVVDMGPEP AYTLASAGIL LNLADAVPEA EDDFLPAAWD AATLKGTDLE
EGTYGFPWYL NSGPTFYNKA VLEECGITVD PNDPPTKQDD IFAMADTFGS NCGGKYALTS
GIPSIQDFGM YGVELMNKDH TEFTFNNAKG VEFVQHYIDM YNAGAFTDDM LNSSTSGESK
SFNGGTQAFM NGNAYSVDDI RKNAPKVFEN LAITDFIANT KPNMFMEMLT VNATSKHQEE
AIKFARFVTN SDNQLAFDKK ANVFPSSKGT IDDKFFNPSD DTMDAEAMRM SADQIRNGEI
WGPAQFTSAC STMLREEIAQ ALQGKITAKE ALDATVKYCN ERL
|
|---|
| |