| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_2093 |
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| Symbol | |
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| ID | 6369222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 2227048 |
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| End bp | 2232192 |
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| Gene Length | 5145 bp |
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| Protein Length | 1714 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642677506 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001952329 |
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| Protein GI | 189425152 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAA AAAATGTAAC GAAGATCAGT GAAACATCTA TAGATGAACA GTTTAAGCTA
ATTAATGGAC TTGCGGATAG TGGCAAGTTG CATGATGCCT TAAAAATTTG TGAAGAGTTG
TCAGTTGCTT TTCATGATAA TCCAAGAATC CTGCATGCGA TGGGAATGCT TCGCTACAGG
ACTGGTGAAT TTGAAGTCGG CGAACAGCTC ATTCGTGAGG CAATAAAACT TAAGCCAGGT
TATGCGGATG CCTTGCAAAA TCTGGGTGTT ATTCTGTCTG GAATGCTCCT CTTTGAAGAG
TCTGAGCAGC TTTATAGGCA AGTGCTGAAA CTCGCACCTG AAAATGCAAA AACAATGGCA
TTACTTGCGT CAGTGTTGAT TACCAAGGGA GAGACAGAAG AGGCACAAGA GTTTTGCACC
AAAGCATTGC AGCTTTGCCC TGACATTGCG TTAAATTATC AAAATTTGGG TAGTCTTATG
CTTTCATTTG GTAAGCCAGA AGAAGCATAC ACTTATTTTA GTCACGGGGT GAAATTACGG
GCAACAGATG CTCTGATATC TAGTGTTTTA TTTACAATGA ACCTACTACC GGAATTCAGC
CAGCAGGATA TTTATCAAAA AACAGTGCAA CTGGCACAAA AAAATTACGA TAATCAAAAT
AGATCTAATC GCGGATATTT AAATTCTGTA TGCAGGGAAC GTAAAATTAG AGTTGGCTAT
GTCTCAGGTG ATTTTAAGCT GCATCCGGTT GTTTACTATT TAAAACCACT CCTTCTAAAT
CATGACAAAG ACACGTTTGA AATATATCTC TACAACTCAT TTCCTTTGAG AGACGAGGTT
ACCGAGACAT TGGCCGGCAA TGTCGCAGCC ATGAGGGATA TATATAACTT ATCAGATACT
CAGGCTGCAA AGTTGATCCG TTGTGATTGT ATTGATATTC TGGTGGATCT TGCCGGTCAT
ACTGGGTTCA ACAGGTTAGG ACTCTTTGCT CAAAAACCGG CTCCTGTGCA AGTCACCTGG
TTGGGATATT TTAATACCAC AGGCTTGGAA TCCATTGACT ATCTTATTAG CGATCCGATT
ACAATCCCTT TGAAGGATGA TCTGTTTTTT GCGGAGCAGA TTGTTCGATT GCCTGTGTGC
AGGTTCTGTT ATGAACCGAT GCCCTACACT CCTCCAACAA CTGCCGCTCC ATGTTTGAAA
AATGGATATA TTACCTTTGG CTCCTTTAAC TCAATCCACA AACTAACGGC AGAGGTTGTT
GATGCGTGGT CTAGAGTTTT ACATGCCGTA TCTCATTCAA AGCTGCTTCT CAAATCCAAA
TCTTTCAGTG ATGATGTCGT TGTAGATGAT TTTATACGTC GTTTTAAAAT ACATGGTATT
TCGTCTAACA GGATTATTTT TAAAAAATTA TCGTCTCACT ATGAAATGCT TCAGGAATAC
GGAGAAATAG ATATAGCTCT GGACCCTTTT CCGTACAATG GTGGCGCTAG TACTTGTGAA
GCACTCTGGA TGGGAGTTCC GGTTGTTACT CTTGAGATGG GAACCCCTAT TAGTCGTCAA
AGCAAAGCAT TTTTGTATGC CATAGATCAT CATGAATTGG TGGCGTCTAC CTTAGACGAT
TATGTTCAAA TTGCTCAAAA TCTTGCTTTA GATCCAAACA GATTGTCATT AATGAGGAGG
AACTTGAGAA GAGAAATGGC AAGCTCCCCT TTATGTGATG GCCTTGCTTT TGCTAAAAAC
ATGGAGACTC TGTATAAGGA AATTTTAGAA AACTGGCAAA CAAATTGCGA TTCTCCTGCA
TCTTTGGAAC ATTTTAGTCC TGAAGAACTC TATTCTTCAG GGGCTGTTGC TCTGAATGAT
GAAGACCCAG AGTATACAAT CAGATTGCTC ACAGAGTTAC TTAAGCGAGA GCCGGCTCAT
TATGAAGCAA TTAATCTGTT GGCTGGTGCT TATAAAAAAC TTGGTCAGCT GGAAAAAGCC
ATAAGCATGT ATCGTGCTGG AGTTCGACGT TATCCAAAAC GTTTTGAGTC TAGGCTGCAA
CTTGGAATTC TGTACTTATC TGTGGCTAGG CATCAGCTTG CCAGGAAGCA TCTTCTTAAG
GTGCTTGAAC TTTGTCCTGA AAATACTCAC GCATTAGTTA ATCTGGGTAT TGTTAACAGG
ATTCTTGATC GTATACATGA TTCAGTAGTT TGTTGTGAGC GTGCGCTAGA ACTAGCGCCC
GATCATTTAG GGGCGATTGG AAATCTTGCG CTTGCCCAAG GTGCAATGGG TGATATTTCC
AAGGCTGTCC AGACACTTAA AAGAGGCGTT GAGATATCTC CTTTTAACTA TGAGATGCTG
ACAACCTTGA TGTCGTTTCT GTTTTATGAT GCTACTGCCA AACAAAGTGA TGTTTTTGAA
CTGTCCAGGC AAGTAGCCGA TGTTTTAGAG CTTGACGCTG AACCTTGGAG TGACTGTCTT
CCGCGTAAGA AGAAAAAGCT GTTGCGAGTT GGTTTTGTCT CTCCAGATTT TTGTCATCAT
CCGGTTGGTA TTTTATTGCT TGCTCTGTTC CAGAATTATA ATTCTGAACG ACTTTCATTG
TTTTGTTATA GCAACGGTAG TAGGCATGAC CAGATAACCG ATAGCTATCA AGAAAAAGCA
GCTATATGGC GAGATATTAC GGCCTTAAGT GATCAGGACG CTGCTGAAAT AATTAGAAAC
GATAAAATTG ATATATTAAT CGATCTTGCT GGTCATACCG TTAAGAGCAG GATACAGATT
TTTTGTTTTC GGCCAGCGAC TATTCAAATG ACATGGATGG GATACGGGCA TACAACTGGT
CTGGATTCGA TTGACTATAT AATTGCAGAT AATGATTTTA TACAGCCGCA AGATGAACAG
TGGTTCGTTG AACGGGTTGT ATGTCTGCCG TATAGCCGCT TTTGTTTTGT GCAACCATCA
CCTAGCCCAG AAGTAGTTGA ATCTCCTTGT CTTGATTCAG AATTCATAAC TTTTGGTAGT
TTCAACAATC CTTTGAAAAT TTCAGAAAAT GTAGTTGAAG TATGGTCTGA TATTATGAAG
AGGGTGCCGA AGTCCCGTTT AGTTTTAAAA TTTAGTACCT TTAAGGATGT GTCTGTTCGG
CGAAGATTTA GAGAGCTATT TTCGACGTAT GGAGTTTCTC CCCGTAGGAT TGAGTTTCGG
ACATTTTCAT CTCCATATCT CATGCTTATG GAACACGGAG ATATTGATAT CATGCTGGAT
ACATTTCCCT TTACAGGAGG CATGACAAGT TTGAATGCTT TGTGGATGGG GGTCCCAATA
ATTACACTGG CTGGTACTAC CCCAATAAGC AGGCAAACCA AAACATTTCT TGATTTACTA
GGGCTTTATG AACTTGTTAC AACAAATAAA GATGAATATA TTGAAACAGC AGTAAAGTTG
TCTTTTGACC TTGAAAAACT GCAGTTTTTT CGAGACTCAT TACGTCCAGC TTTACTTAAC
TCTCCGCTTT GCGATGGGAG AAGGTTCGCA CATGATGTTG AAGAGTTACT GTTTCAGTTA
TGGGGGGGCG GTGAACAAAA TACTCACCAA GCTATAGAGT ATGCACAGTT ATGTACTCAA
CAAGGGAACT TCACTAGGGA ACGAAATAAT CCTCTCTCGA GCCAAAAATT GTTTAAGAAG
GCGATTGCTT TAGACAAAAA TAATTTTATT GCACACAACA GCTTGGGGCT CGTTTATTCC
TCACTTGGAC AGCTGAACAA AGCATTTGAG TGTTTTGATA AGGCCCTTGA GATTGAAGAT
CGTTACGCTG AGGCATGGAA TAATAAGGCA AGTTTGCAAA TGGTTTGCGG TAACATGTCT
GAGGCAAGTA AATCATATGA CAAGGCCTAT GCATTACAGC CCGAGAGGCT TCATATTAGA
TCAAACCAAT TGCTTTTTAT GAATTATACT CCAAAAGTCA CGCAGGAAGA ATACTATACG
AGAAGTGTTG CTTGGAAACA GTATATAGGG TGGCAAGCAA GTGCGCTTGA TTACAATGAT
TTGTTAGTCC AGGATGCTGT CGTACCTGAG AAGTTAAGAA TTGGATTTGT TTCGCCTGAT
TTTAGAAAAC ACTCTGTGGC CTATTTTCTT GGTCCGTTAT TTAGTCATCT GGATAAGAAA
AAATACGAAA TTGTATGTTT TTCTGATGTA ATTAAAAATG ACCAAGTAAC AAATCGTTTG
CAATCATATG CAGATGAATG GCATGAGGTG TTTGGCATTG TTCATCAGGA GTTGTTTGAA
GTTATTAAAG AAAATCATGT GCATATTTTA TTTGATCTGG CGGGTCACAC TTCTAGAAAC
AGGTTGGAGG TGTTTGCTGC AAAGCCGAGT CCTATACAAG TTTCATGGTT GGGCTACCCC
AATACTACAG GCCTAACAGA GATTGATTAT AGATTTACTG ACGATATAGC AGACCCTGTA
GATGGTGATG ATAGATGGTA TACTGAAAAG CTAGTTAGAC TTTCTGAAGG TTTCTTATGT
TACGAACCGC CGAAAGAGGC ACCAAATGTT ACTGACTTTC CTTGTATCAG AAAAGGATGT
GTCACATTTG GTTCATTTAA CAATATTTCT AAAACGTCTC CTTATGTAAT AGAAACATGG
GCTACAATTC TTAACAGAGT TGAAGGTTCA GTCATAATGT TGAAAAACTG GTTTTTCTCC
GATCAATCTA TACAACAAAA GTTTTATGAT GGGTTTGCAG CGTTTGGAAT TACATCGGAT
AGGATTATTT TGTTACCAGC AGCCCCCGAT ATCAAGGAAC ACCTTTGTAT GTACCAGCAT
GTCGATATAG CATTAGATAC CTTTCCCTAT AATGGTACAA CTACAACCTG TGAGGCCTTG
TGGATGGGGG TCCCTGTGGT CACTTTTACA GGTGATCGAC ATGCGGGAAG AGTTGGAGCA
TCAATTTTAA ATCGGATCGG ATTATCAGAG CTAGTTGCAA GAGATAGAAA CGATTATATT
GATCGGGCGG TTATGTTAGC TGAGAATATT TGCCAGCGTC CAAATTTTCG ACAGTCTATC
CGTGAATGTT TTATCAACTC TTCGTTGTTT GATGGTGAAC TTTTTGCCCG ATCTTTTGAA
AGCGCACTTG ATAAAATATG GAGTGACTAC AAATGCAGCA AATAG
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| Protein sequence | MNLKNVTKIS ETSIDEQFKL INGLADSGKL HDALKICEEL SVAFHDNPRI LHAMGMLRYR
TGEFEVGEQL IREAIKLKPG YADALQNLGV ILSGMLLFEE SEQLYRQVLK LAPENAKTMA
LLASVLITKG ETEEAQEFCT KALQLCPDIA LNYQNLGSLM LSFGKPEEAY TYFSHGVKLR
ATDALISSVL FTMNLLPEFS QQDIYQKTVQ LAQKNYDNQN RSNRGYLNSV CRERKIRVGY
VSGDFKLHPV VYYLKPLLLN HDKDTFEIYL YNSFPLRDEV TETLAGNVAA MRDIYNLSDT
QAAKLIRCDC IDILVDLAGH TGFNRLGLFA QKPAPVQVTW LGYFNTTGLE SIDYLISDPI
TIPLKDDLFF AEQIVRLPVC RFCYEPMPYT PPTTAAPCLK NGYITFGSFN SIHKLTAEVV
DAWSRVLHAV SHSKLLLKSK SFSDDVVVDD FIRRFKIHGI SSNRIIFKKL SSHYEMLQEY
GEIDIALDPF PYNGGASTCE ALWMGVPVVT LEMGTPISRQ SKAFLYAIDH HELVASTLDD
YVQIAQNLAL DPNRLSLMRR NLRREMASSP LCDGLAFAKN METLYKEILE NWQTNCDSPA
SLEHFSPEEL YSSGAVALND EDPEYTIRLL TELLKREPAH YEAINLLAGA YKKLGQLEKA
ISMYRAGVRR YPKRFESRLQ LGILYLSVAR HQLARKHLLK VLELCPENTH ALVNLGIVNR
ILDRIHDSVV CCERALELAP DHLGAIGNLA LAQGAMGDIS KAVQTLKRGV EISPFNYEML
TTLMSFLFYD ATAKQSDVFE LSRQVADVLE LDAEPWSDCL PRKKKKLLRV GFVSPDFCHH
PVGILLLALF QNYNSERLSL FCYSNGSRHD QITDSYQEKA AIWRDITALS DQDAAEIIRN
DKIDILIDLA GHTVKSRIQI FCFRPATIQM TWMGYGHTTG LDSIDYIIAD NDFIQPQDEQ
WFVERVVCLP YSRFCFVQPS PSPEVVESPC LDSEFITFGS FNNPLKISEN VVEVWSDIMK
RVPKSRLVLK FSTFKDVSVR RRFRELFSTY GVSPRRIEFR TFSSPYLMLM EHGDIDIMLD
TFPFTGGMTS LNALWMGVPI ITLAGTTPIS RQTKTFLDLL GLYELVTTNK DEYIETAVKL
SFDLEKLQFF RDSLRPALLN SPLCDGRRFA HDVEELLFQL WGGGEQNTHQ AIEYAQLCTQ
QGNFTRERNN PLSSQKLFKK AIALDKNNFI AHNSLGLVYS SLGQLNKAFE CFDKALEIED
RYAEAWNNKA SLQMVCGNMS EASKSYDKAY ALQPERLHIR SNQLLFMNYT PKVTQEEYYT
RSVAWKQYIG WQASALDYND LLVQDAVVPE KLRIGFVSPD FRKHSVAYFL GPLFSHLDKK
KYEIVCFSDV IKNDQVTNRL QSYADEWHEV FGIVHQELFE VIKENHVHIL FDLAGHTSRN
RLEVFAAKPS PIQVSWLGYP NTTGLTEIDY RFTDDIADPV DGDDRWYTEK LVRLSEGFLC
YEPPKEAPNV TDFPCIRKGC VTFGSFNNIS KTSPYVIETW ATILNRVEGS VIMLKNWFFS
DQSIQQKFYD GFAAFGITSD RIILLPAAPD IKEHLCMYQH VDIALDTFPY NGTTTTCEAL
WMGVPVVTFT GDRHAGRVGA SILNRIGLSE LVARDRNDYI DRAVMLAENI CQRPNFRQSI
RECFINSSLF DGELFARSFE SALDKIWSDY KCSK
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