Gene Glov_1352 details

Gene Information

• Locus tag: Glov_1352
• Symbol: rpsC
• ID: 6366857
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: +
• Start bp: 1398456
• End bp: 1399088
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642676754
• Product: 30S ribosomal protein S3
• Protein accession: YP_001951593
• Protein GI: 189424416
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0092] Ribosomal protein S3
• TIGRFAM ID: [TIGR01009] ribosomal protein S3, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.112713
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGGACAGA AAGTAAATCC GATAGGTTTC AGACTTGGCG TCATCAAGAC CTGGGACTCG 
AAGTGGTACG CTGAGGCTGA TTTTGCCAAG AACCTCCACG AGGACCTGAA GATTCGCCAG 
TTTTTGAAGA AGCGTCTGTA TAGTGCAGGC ATCTCAAAGA TTGAAATTGA GCGTGCTGCA 
AACAAGACCA AGATCAATAT TCACGCAGCC CGTCCAGGCC TGATTATTGG AAAGAAGGGT 
GCTGAAGTAG AGCTGCTTAA AAAAGATCTG GCTGCTATTA CCTCAAAAGA AGTGTTCATT 
AACATTAATG AGGTTCGTAA GCCTGAACTT GATGCTCAAC TGGTTGCTGA AAACGTAGCA 
CTTCAACTTG AGCGTCGGAT TGCATTCCGT CGCGCCATGA AGAAGAGTGT AACCTCTTCA 
CTCAAGTTTG GTGCAAAGGG TATTCGTATC ACCTGTTCAG GCCGTTTGGG TGGTGCTGAA 
ATGTCACGTA CCGAGTGGTA TCGTGAAGGC AGGGTACCGT TGCATACCCT GCGTGCAGAT 
ATCGATTACG GGTTTGCCGA GGCCAAGACC ACCTATGGTA TCATCGGGGT AAAGGTCCTG 
ATCTTCAAGG GTGAAGTCCT GCCAGGACAA TAA 

 

Protein sequence

MGQKVNPIGF RLGVIKTWDS KWYAEADFAK NLHEDLKIRQ FLKKRLYSAG ISKIEIERAA 
NKTKINIHAA RPGLIIGKKG AEVELLKKDL AAITSKEVFI NINEVRKPEL DAQLVAENVA 
LQLERRIAFR RAMKKSVTSS LKFGAKGIRI TCSGRLGGAE MSRTEWYREG RVPLHTLRAD 
IDYGFAEAKT TYGIIGVKVL IFKGEVLPGQ