Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1645 |
Symbol | |
ID | 6353952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1782509 |
End bp | 1784269 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642669251 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001943667 |
Protein GI | 189347138 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGAAT TTGATTTTCT CGGTGAGCTG GTGCTGATCG GTGTTCTGGC AATCGCCATT ATCCTTATTT TTCAGCGCCT CAGGATTCCT CCAGTTATCG GTTTGATTTT TACCGGCATT GTGCTTGGGC CTTCCGGCAT CGGTGCCGTA TATGACGAGA AGCTCATCGG AACCCTCGCC GAGCTGGGTG TTATTCTGCT GCTGTTTACC ATCGGGCTTG AGTTTTCTCT CGAGGAGCTC AGGAGACTGA AAAAAATCGT GCTGGTCGGC GGAATCGTGC AGATTCTTGT GACCGGACTT GCTGTCAGCT GTCTGGCTTA TTGGTTGTTG TACGGTATCG GCAAAGCGAT AACGGTCGAA GCGGCCATAT TCATGGGCTT TGCTTTTTCC GTCAGCAGTA CGGCCATCTG TCTGAAAATT CTTACAGACC GCGAGGAGCT TGCCCTGCCG CATGGCAAAA TAGCCCTGGG TATCCTGATT TTTCAGGATA TCGCTATCGT TCCCCTGATG ATAGGCATCA ATTTTCTCAG TCCCGATGTT ACACCGTCCC TAGAGAATAT TTTCAGAAAA GTCGGGTTCA TTGTGCTTTT CGGAGCAGTC ATTTTTACCG GTTTCAGGCT GTTCATGCCG CGAATGGTGC GATTGATCGC CTCCCTGCAC GCCAGGGAAG TGCTCGTAAT CGGCGCGCTG GTCATCTGTT TCGGTGCGGC ATATCTCACA TCACTTGCCG GTCTCTCTCT GGCACTCGGT TCATTTGTCG CAGGTATGGT AATAGCAAGC ACCGATGAGA GCCATCAGAT CAGTCTCACC ATCGATCCGT TTCGTGAAGC GTTTACCAGC ATTTTTTTTA TTTCCGTGGG GCTCCTTCTC GATGTGAAAG TGATCAATCT TCCCCTTTTT ATTTCCATCG CTCTTGGAGT CCTGCTGGTC AAGGGCCTGC TTGTCGCCGG CGTATCGCTT TTTCTCGGCT ACTCCCTGCG GGTCAGCATG ATGGCCGGAA TGGCGCTTGC CCAGATCGGG GAGTTCTCCT TTGTGCTGGC CGAATCCGGC CTGAATAACC GGATTATCAA CAACGAAGTG TTTCAGGCCA TGCTTGCCAT TATTGTGGTG ACCATGATCG TTACTCCGGC CATGATCGCC ATTGCACCCA AAGTCGCCGA TCAGGTTGCT CCGGTACTGG GATTTATTCC CCTTCCGAAA AGGGATTCCG GTGCCGCACC TGTCCGGCCA GCCGACAGTA CCATTATATG TGCCGGGGAG ATTCATGCAG CGATTATCGG GTTCGGTGTC AACGGGCAGA ATGTTGCCGC AGTGCTTCAT GCAACCAATA TCTCCTATTC GGTGCTTGAA GTTGACCGCG AGATTGTCAG GGTAATGCGC CGGAAAGGTG AACCGATTTA TTACGGCGAC TGTACGGAGA AGAAATCGCT GCTTCGTGCC GGGATCGATC ACGCCCGTGC CGTTGTGCTC GGTATATCGG ACAATGGCGC CGTTCGTAAA TGTATTCCGT TGATTCGTGA AATAAATCCC AAGGCATTTG TCATTGTCAG GGCAAGGACG CTTGACGAGG TTGATACTCT CTATAAAGCA GGAGCCGATG TTGTCGTAAC CGAGAAATTT GAAACCTCAA TCCAGATTTT TTCCCAGCTG CTCAACCACT TTACGGTTGA TCCGGAACTG ATTCTTGAAC AGCAGGAGAT TATCCGCCGG GAGTGCGAAA AGATCTTTTT TCAGACGACT GCACAGACAA AACAGTCATG A
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Protein sequence | MHEFDFLGEL VLIGVLAIAI ILIFQRLRIP PVIGLIFTGI VLGPSGIGAV YDEKLIGTLA ELGVILLLFT IGLEFSLEEL RRLKKIVLVG GIVQILVTGL AVSCLAYWLL YGIGKAITVE AAIFMGFAFS VSSTAICLKI LTDREELALP HGKIALGILI FQDIAIVPLM IGINFLSPDV TPSLENIFRK VGFIVLFGAV IFTGFRLFMP RMVRLIASLH AREVLVIGAL VICFGAAYLT SLAGLSLALG SFVAGMVIAS TDESHQISLT IDPFREAFTS IFFISVGLLL DVKVINLPLF ISIALGVLLV KGLLVAGVSL FLGYSLRVSM MAGMALAQIG EFSFVLAESG LNNRIINNEV FQAMLAIIVV TMIVTPAMIA IAPKVADQVA PVLGFIPLPK RDSGAAPVRP ADSTIICAGE IHAAIIGFGV NGQNVAAVLH ATNISYSVLE VDREIVRVMR RKGEPIYYGD CTEKKSLLRA GIDHARAVVL GISDNGAVRK CIPLIREINP KAFVIVRART LDEVDTLYKA GADVVVTEKF ETSIQIFSQL LNHFTVDPEL ILEQQEIIRR ECEKIFFQTT AQTKQS
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