Gene Clim_1274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_1274 
Symbol 
ID6355375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp1376159 
End bp1376782 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content49% 
IMG OID642668890 
ProductNLP/P60 protein 
Protein accessionYP_001943320 
Protein GI189346791 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.951335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTCTG CCAATTTTTT TTGCCCTACG CGCTCCGTTT CGGGAAACCC GCAGCATAAG 
CTCCGTCTCA TTTCCGTTCT CGTCCTCTTT TTTACAACAC TCTCGCTTAC TCCTCTTACC 
GAATCCTTTG CCGCCATTTC TCCTGAAAAT AACATCGCAC AATCCGAACC TGAAAAGTCA 
TCCTGTTCCA TGCGGAACTT CTTCAGTGAT GTCAAACAGT TTTTCGGAAT CAGATACCGC 
TTTGGAGGCC AGACTCCCGA AGGGTTCGAC TGCTCCGGTT TTGTTCGCTT TATGTACGAT 
CGGGTTTTCA GCATGAGACT TCCCCGTACA TCGAGGGAGA TGGCGACCAT AGGAAAAAAA 
GTAGAGCGCA GTGAACTCAG GCCGGGTGAT CTGATATTTT TTCAGACAAA AGGAAGCCGC 
ATCAACCACG TGGGCATATT CGTCGGCAAC GACACTTTCG TACACTCATC TCTTTCAAAA 
GGCATTACCG AAGACAAACT CCAGCAGAAA TACTACGACA GACGCTTTGC CGGAGCCGTT 
CGAGTGCTCG ACAACCCAAA CTCCGACTTC CTTTCTCTTC CCTCGCAATC CGAAACAGCC 
AGACAGCTGA ACGAGCCTTC CTGA
 
Protein sequence
MLSANFFCPT RSVSGNPQHK LRLISVLVLF FTTLSLTPLT ESFAAISPEN NIAQSEPEKS 
SCSMRNFFSD VKQFFGIRYR FGGQTPEGFD CSGFVRFMYD RVFSMRLPRT SREMATIGKK 
VERSELRPGD LIFFQTKGSR INHVGIFVGN DTFVHSSLSK GITEDKLQQK YYDRRFAGAV 
RVLDNPNSDF LSLPSQSETA RQLNEPS