Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1003 |
Symbol | |
ID | 6355452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1094425 |
End bp | 1095642 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642668627 |
Product | periplasmic binding protein |
Protein accession | YP_001943058 |
Protein GI | 189346529 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0182612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCATC CGGAAGGAAC GATCCCTTCC CGTAAAGGGG TTCGCCCGGT TCTGCTGCTT GCCGGTCTGA TCCTGCAGCT GCTGTTTTTT TCGGGGTGCA CTGCCGTGCA GGAAGAGGGC TCCGGCCCGT CGCCATCCGG TTCCGCGCCG CATGCCGGGA GCGGTTTCAT CCGGTATGCA AAAGGGTTTT CCCTGCAGCA TCACGCCGGA TTCATCACCC TGCACATCGA TCCGGCTCCG GACGGGCGGA AGGACACGCT GCGCTATATC CTGCTTCCCT CCGGAGCTTC GGTTCCGAAG GGTTTCCATG GCTATGTTCC CGTCCGGACC CCGGTCAAAA GGATTGCGGT TTTTTCCACC ACGCATATCG GTTTTATCGA TATGCTCGGC AGGAGTGACG GCATTATCGG GGTTTCCCGT CCCGAGTTTG TCAACACCCC TGCGGTCAGA TCCCGCATAA GGAGCGGGGC GATCAAAGCG ATCGGCATGC CGTTCAGTCC CGATGTCGAG GTTCTGCTGA ATCTGGACCC CGATCTGGTT ATCGCGCCGG CGCTTCCCGC AGCCCGGAAG ACCGATTATC AGGCGCTTGT CCAGGCGGGC ATCCCGGTGC TCGTCGTTGC CGAATGGCTG GAGCCGTCGC CTCTCGGGCG CGCCGAGTGG ATCAGGCTGT TCGGCGCTCT TTTCGGCAGG GAGGATGCGG CTCGCGAAAA GTTCGACGCC ATAGAGCGCT CCTACCGGAA ACTCGCCGCC CTTACAGAGA ACGTCAGGGA GAGGCCTGCG GTACTGACCG GCCTTCCGGT AAAGGATACC TGGTTCGTTC CTGCCGGCGG CAGTTACGTC GCGGCCCTGC TGCACGACGC CGGTGCGGCC TATCCATGGA GCGACAGGCC CGGTACGGGC AGCATAAGCC TGGATATCGA AGCGGTCTAT CCCGTTGCGC TCGAGGCGCC CTGCTGGTTG AACCCCGGAG CGGTCGAATC GATGGACGAA CTGCTTGCCA TGGATGTCCG CTTCCAGGAT ATGCTTTCCG TAAAAACAGG CAGGGTCTAC AACAACAACC GCTGGATTAA CGCAGCAGGA GGAAACGCCT ACTGGGAGTA CGGCGTTCTC AGGCCCGATC TGATTCTCCG CGATCTTATC TCCATCCTGC ACCCCGGGTT GCTGCCGAAA AAGGGCGGCA AACCCGATTC CTTAACCTTT TACCGGGAGA TCAGGTAG
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Protein sequence | MTHPEGTIPS RKGVRPVLLL AGLILQLLFF SGCTAVQEEG SGPSPSGSAP HAGSGFIRYA KGFSLQHHAG FITLHIDPAP DGRKDTLRYI LLPSGASVPK GFHGYVPVRT PVKRIAVFST THIGFIDMLG RSDGIIGVSR PEFVNTPAVR SRIRSGAIKA IGMPFSPDVE VLLNLDPDLV IAPALPAARK TDYQALVQAG IPVLVVAEWL EPSPLGRAEW IRLFGALFGR EDAAREKFDA IERSYRKLAA LTENVRERPA VLTGLPVKDT WFVPAGGSYV AALLHDAGAA YPWSDRPGTG SISLDIEAVY PVALEAPCWL NPGAVESMDE LLAMDVRFQD MLSVKTGRVY NNNRWINAAG GNAYWEYGVL RPDLILRDLI SILHPGLLPK KGGKPDSLTF YREIR
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