| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0181 |
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| Symbol | dapF |
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| ID | 6355835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 198250 |
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| End bp | 199068 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642667809 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001942259 |
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| Protein GI | 189345730 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00086691 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGATCC ATTTCACCAA GCTCTCGGGA GCGGGGAACG ATTTCATCGT GATAGACAAC
AGAAATCATC CCGTTCATTT AAGCACAGCC CGGATTAAAG CCATGTGCAC AAGAAGAACC
GGCATCGGCG CGGACGGCCT CATCCTTATT GAGCCCTCTC GGCATTTCGA TTTCAGCATG
AACTACTATA ATGCTGACGG CTTGCCGGGA TCGATGTGCG GCAACGGCGG AAGGTGCGCC
GTTTATTTTG CCCACGCCAC AGGAGTTCCC GCTGCCGATC AGGGCAGATA TTCTTTTGAA
GCCAATGGTA ATCGCTATGA AGCCGCAGTA ACCGGAAAAG AAACGGTGCG GCTGCACATG
CTCGATCCCG AGGATTTCCG CAATGCCGTT GCCGTAGAAG GGTTCAATTG CCACTATGTC
AACACCGGCT CGCCGCATGC CGTCATATAT ATCGAGAGCC GGAAACTTGA AGCACTTGAT
GTATCCGGCC ATGGAAAAGC CATCAGACTG AGGTCGGACG TTTTTCCTGG CGGAACCAAT
GTGAACTTTC TTGAAATCAC CGCACCCGAC AGCATCAGTG TAAGAACATT CGAGCGGGGC
GTTGAGGATG AAACACTTGC CTGTGGAACC GGAGCGGTAG CGGCGGCTCT CATGAGCTTC
CGGCTCGGAA AAGTCTCCTC TTCGACAGTA AAAGTAAAAG TCCGGAGCGG CGACACGCTC
GAAGTCGCAT TCAGTGAAGA CCTGAAATCA GTAACGCTCA CCGGCCCGGC GAAAATCATC
TACAGAGGCA TTGCGGAAGT GCAGAACGAC GGTCTGTAA
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| Protein sequence | MQIHFTKLSG AGNDFIVIDN RNHPVHLSTA RIKAMCTRRT GIGADGLILI EPSRHFDFSM
NYYNADGLPG SMCGNGGRCA VYFAHATGVP AADQGRYSFE ANGNRYEAAV TGKETVRLHM
LDPEDFRNAV AVEGFNCHYV NTGSPHAVIY IESRKLEALD VSGHGKAIRL RSDVFPGGTN
VNFLEITAPD SISVRTFERG VEDETLACGT GAVAAALMSF RLGKVSSSTV KVKVRSGDTL
EVAFSEDLKS VTLTGPAKII YRGIAEVQND GL
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