Gene Clim_0030 details

Gene Information

• Locus tag: Clim_0030
• ID: 6355553
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 33880
• End bp: 34419
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642667655
• Product: Redoxin domain protein
• Protein accession: YP_001942117
• Protein GI: 189345588
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1225] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 46
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAACTA TGATCAGGAC GGCAAAAGGA CAAATGATCC CATTTATAGC AGCCTTGCTG 
CTGTTTCTTG CTTTTCCGGC AGTCCAGGCG GCGGAAAAGG TCCCGGCTCC GGCATTTTCA 
GCCGTTGCTG TTGACGGAAA AGCGGTTTCT TCCCGGCAGT TTGCAGGAAA AGCCTACATC 
GTCAATTTTT TTGCTTCATG GTGCCCTCCC TGCAGGTCGG AAATTCCCGA CATGGTGGCC 
CTGCAGAAAG CATACAGGGC CAAAGGCTTC ACCTTTATAG GTGTCGCAGT CAGCGAGAAC 
GACGATTCCA TAAAAAGCTT TATGAAAAGC ACCGGAATCA ACTATCCGGT GATCATGGCA 
GATCAGAAGC TGATCAATGC TTACGGACGT TACGTCGAAG GGGGGATCCG ATCGATTCCC 
ACAACATTTG TCGTCAACAG AGCCGGCCAG ATTACTCAGG TTATTACAGG AGCGAGAAGC 
AAGGCGGTTT TCGAGAAAGT GATTCTCGAT GCAATGAAGC CGGCCAAAGC TGTCAAGTAA 

 

Protein sequence

MRTMIRTAKG QMIPFIAALL LFLAFPAVQA AEKVPAPAFS AVAVDGKAVS SRQFAGKAYI 
VNFFASWCPP CRSEIPDMVA LQKAYRAKGF TFIGVAVSEN DDSIKSFMKS TGINYPVIMA 
DQKLINAYGR YVEGGIRSIP TTFVVNRAGQ ITQVITGARS KAVFEKVILD AMKPAKAVK