| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0591 |
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| Symbol | |
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| ID | 6331518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 608333 |
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| End bp | 609649 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642656878 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001930783 |
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| Protein GI | 188996532 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAATC AAGACACAAA AAAGATTTTA TCTTTGGCAG TTCCTGCTGC TTTAAGTAAT
TTTTTAGATA TCGTTCAAGT GCTTATAGAT ATGATCATGC TTGGAAGGGT TTCTCCTTCT
GCCATCGCGT CAGCCGGCAT ATCTATGCAG TTTTTAGGGC TTTTGTATGC AATGATGGCT
ACTTTTTCAG TAGGTACTTC TGTTGTAATT TCGCGATACA TCGGAGCAAA GCAGTACTCA
CAGTCAAACA AAACTGCCTT TTCTATCTCT GTTTTTTCTT TACTGCTATC TATTCCATTT
ACAATCTTAG GCTTTTTCTT TTCTAAGTAT ATTTTTATGT TTATGGCAGG TTCTGATGAA
GTAATCAGAC TTGGTCAAGA GTATTTTTCT ATATTGGCTT TAACCTTTCC GGTTTTATTC
ATGGAGATGG CTATATACTC TGCATTTAAT GCAGCAGGAG ACACAAAAAC GCCTTTAAAG
ATAGTAATCG TTGCAAACAT TATAAACACG GTGCTTGCTT ATGGACTGAT ATTTGGGAAT
TTTGGATTTC CAAGGCTTGA AGTCAAAGGT GCTGCCATTG CCACAGCCAT AAGCTATTAC
ATAAGCTTTT TTATGTATCT GTATGTGATA AACTCAAAAC ATTCAAAAAT TAGATTTGAA
TTTGATTTTT TGCTTGAAGA AGTTAAGAAG ATTTTTAAAA TTGGCGTTCC AAGTGGTTTT
GAAAGGACTT TAACATACTT TTCTTTTTTG CTTTTTGTAA AGATAATAGC AGATTATGGA
ATTTATACAC TTGCAGGTTA TCAGGTAGGT CTGAGGATAG AAGGGCTTGC GTTCATGCCG
GGTTTTGGTT TTACAATCGC AGCAATGACC CTTGTAGGTC AAAGTCTTGG ATCTAACAAT
CCACAGCAGG CAGAAGCATA TGCAAAAGAG ATAATAAAGA TTGCTTCTAT TTTCATGGGT
CTTATGGGTG TTGTGATGGT AATCTTTCCT GAGTATTTAG CTATGGTGTT TACAAATGAT
AAAAAAACAA TAGAAGAGGC TTCTTTATAT TTAAGGATAG TAGGACTAAC TCAAATTCCT
TTAGCGATAG GGTTTGTTTT AAGCGGTGTT TTAAGAGGTG CAGGAGCTAC GAAAACAACA
TTATACATAA ATACATTTTC TTTATGGGTT TTAAGAATCA TTCCGGCTTA CATACTTTCA
AAAATTTTTG GAAATATTTT ATTTGTGTAT TTAGCAATGT TTTTAGAAAC ATACTTAAAA
GCAGCTATAC TTTGGTATTT CTTTAAAAAA GGCGATTGGA AAAAGATTAA AGTTTAG
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| Protein sequence | MLNQDTKKIL SLAVPAALSN FLDIVQVLID MIMLGRVSPS AIASAGISMQ FLGLLYAMMA
TFSVGTSVVI SRYIGAKQYS QSNKTAFSIS VFSLLLSIPF TILGFFFSKY IFMFMAGSDE
VIRLGQEYFS ILALTFPVLF MEMAIYSAFN AAGDTKTPLK IVIVANIINT VLAYGLIFGN
FGFPRLEVKG AAIATAISYY ISFFMYLYVI NSKHSKIRFE FDFLLEEVKK IFKIGVPSGF
ERTLTYFSFL LFVKIIADYG IYTLAGYQVG LRIEGLAFMP GFGFTIAAMT LVGQSLGSNN
PQQAEAYAKE IIKIASIFMG LMGVVMVIFP EYLAMVFTND KKTIEEASLY LRIVGLTQIP
LAIGFVLSGV LRGAGATKTT LYINTFSLWV LRIIPAYILS KIFGNILFVY LAMFLETYLK
AAILWYFFKK GDWKKIKV
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