Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0491 |
Symbol | |
ID | 6331206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 503343 |
End bp | 506879 |
Gene Length | 3537 bp |
Protein Length | 1178 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642656780 |
Product | hypothetical protein |
Protein accession | YP_001930686 |
Protein GI | 188996435 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGACA AACAGGCAAA AGAGCTTGTA AGAGATACGT TTGAAAGCGA GTTTAAAAGA GAAAAATTTG ATAAGTTTAT AACTGAACTT TTAAAGAAAA ATTTTGATAG GAGTAAAGCT CTTCCAAAAA GAAGCGGAAA TCAAGCAGTA CCGGAAAAGT ACAGAGATTT TATAACAGCT TGGGAAAGAT TAGGACGCTA TAAAGACGCA GATAAAATTA TAGACGTCCT TATTGTCTAT CTTAAAAAAG GACAATCTTT ATACAGGTCA AGAGTAGCAC AGAGGAACTT TGTAGCTGAT TACTTAAGAG GGACTATTGG AACTAAATCC ATTAAAGATG CTGCACTCGT TGCTTTTGTA TCTCCTGATG AGGAAGATTG GAGATTTTCT TTTGTTAAGT TAGAGTATAA AAAAGAAGAC GGTAAGGTAA AAGAAGTACC TTCACCCGCT AAAAGATGGT CTTTTTTGGT AGGAAAAAAT GAAAAGAGCC ACACCGCACA ATCAAGATTT TTAGAGCTTT TAAAATCAGA TAAAAATCCA AGCTTAGAAG AGATTCAAAA AGCCTTTGAT ATAGAGACTA TCACTAAGGA ATTTTTCAAA GAGTATAGAG ACCTATTTAT CAAAACTAAG CTTGAACTTG ATAAGATTGT AAAAGAAAAT CCGGCTGTTA AAAAAGAATT TGAAGATAAA AATATCAGCA CTGTGTCCTT TGCTAAAAAG CTTCTTGGTC AAATAGTGTT TTTATACTTT TTACAGAAAA AAGGTTGGTT TGGTGTAGAG AAAGGTAAAG ATTTTGGAAC AGGTCCAAGG GATTTTATTA GAAGGCTTTT TAATGGTGAG TATATAAGCT ATAAAAATTT TTATAACGAA GTGCTTGAAC CTTTGTTTTA CGAAGCTTTA AGAGTTGATA GAAGTTTTAA CGACCATTAT TACGATAAGC TTAATTGTAA AATTCCATTT TTAAACGGTG GACTTTTTGA CCCGCCAAAC GATTTTAATT GGGTGGATAT AGACCTTCTA ATTCCAAACG AATTGTTCTC AAACGAAGCT GAAAACGGTA TTCTTGATGT ATTTGATAGG TATAACTTTA CTGTAAATGA AGAAGAGCCG CTTGAAAAAG AAGTAGCACT TGACCCAGAG CTGCTTGGTA AGATTTATGA AAAACTCAAC GCAATCAGAG AAGATAACTT TGATGAGTAT TTAAAAGCTC TAAAGTCTTC TACCAAAGAG GAAGACAAAT TTAACAGGGA GTATGGAGTT TATTACACTC CAAGAGAAAT TGTTCATTAT ATGTGTAGTG AAAGTCTTAT TTACTACCTT GAATCTCAGT TAGATGGTAA GGTTAGTAGA GAAGATTTGG AAGTGTTTGT AAATTTTGCT GACTTGCTTA TTGAAAATGA AAAAGTAGCA CAAAAGAAAG TTGAAAATGG CAATAAAGAA ACAAAATACG AATATAAAAT TCCGAAAAGC ATTATACAGA ATGCACAAGA AATAGACAAA CTGCTTGATG GTTTGAAAAT CTGCGACCCT GCGGTTGGTT CGGGAGCTTT TCCTGTTGGT ATGCTTCATG AGATTGTAAA GTTGAGACAG CTTCTTTCTG TATACACAAA AAATAATCTT AACACATACG ATTTAAAAAG GCATACGATA GAGAATTCTA TCTATGGTGT TGATATAGAC CCGGGAGCTA TTGAGGTTTG TAAGTTAAGG TTTTGGTTGT CTTTGGTTGT TGATGAGGAG TCTTTTAAGG ATATAAAACC ACTCCCAAAC TTAGATTACA AGATAGTTAG AGGAAATTCG TTAATTGGAT TTCCTCCTAA TGATTTGTTG AGTAAAGAAA ATAAGATATC CGAGTTAGAA AGTAAATATT TCTCAGAGAC ACATCCGGAC AGAAAAAGAG AGATAAAAAA GGAGTTAGAT GCGTTAATTT TGAAAAAGCT TGAAAATTCT GAAGGAGTAT TTGGATATAA GGCGGATTTT GATTTTAGAT CTTTCTTTCC ACAGGTTTTC ATAGAAGGCG GGTTTGATAT AGTGATTGGA AATCCGCCGT ATGTATCTAC AAAGGGCGTT GATGAGAAGT TTAAGAAAGT CTTAGAAAAG ATTTACGGCT TTTCTGATGA CCTGTATAAT CATTTTTACT TTAAAGGTAT TGAAATTTTA AGTGAAAATG GAATTTTGGC GTTTATCTCA TCTAAAACTT TTTGGACTAT TCAGACAAAG AAAAATTTAA GAAAGCTAAT TTTAGATAAT AAACTTTTAC AGTTGGTAGA TACTGCAAAT CCTTTTGAAA GTGCTATGGT GGATACTTGT ATTACCATTG TTCAAAAAAC AAAAGCCAAT GATTATGAAA TACTTTTTAT AGATGCAAGA AATGGATTGG ATAAGAAAGA AGTTTATAAA GTTAAAGATG AAATTTATAA AAACGTTGCA AATAATGTGT TTTTTATGCC GTCGGAGTTT AATTTAAAGA TTTATGAAAA GCTTGGAAAG AAGGTTAAGG AGCTTTTAGA TAGATGGTGG GATAAGATCT CTTCAAGTAA AAATATAGAA AAGTATAAAA AAGAGTTAGA AGCTTACAGA AATTCTTTAA AAGTAGGCGA TATAACTTTG CTTGGGTTGA TTACAGAAGG CGGACAAGGG CTTGCAACTG GTAATAACGG CAAATACGTT GGTGTATTGG AGGGTACCAA ACAGGCTGAA AAAGTTAGAA AGGAAAGACC TGAGAAGCTT TGGAATTTTA TAAAAACTCA AAATCCAAAG GAGTTTAGCA ATCTAAAATC TAAAAAAGAT GTAGAGGATT ATCTTAATAG TTTATCTGAA AAAGAGATTA GAAAGTTGTT TGATGGTTTA AAGGAAAAAT ACGGAAGGGA TATTTTTGGA CAAGGTTGGC TTTACAGGAT TGTTAGTAAA GATGAGATAG CTGATGTGGA TAGTTTGAGT GATGATGAAA AGTTAAACGG AATAGATGGA GATAAAACGT TTGTTCCGTA TGATAAAGGA GATAAAGACG GCAATCGCTG GTGGGCACCA ACGCCGTATT ATATAGATTG GAGCAGAGAG AATGTTAGGT TTTTAAAGGA AAATTCAGGA AAGAAAGGCG AGGGAATGCC AGTAGTTAGA AATCAGCAGT TTTATTTTAA AGAGGGTTTT TGTTGGACAG ATGTAAATTC AACGTATTTA AAATCAAGAA TAAAAGAAAA AGGAGTATAT GATGTTTTGA GTATGTCGTT ATTTACAAAA TGTAATATAC CAGATTACTA TTATGTATGC ATGATTAATT CAAAGTTTAT TAGTGAGTAT GTTGATGATT TTGTTAATTC AACATCGCAT TTTCAAATCA ACGATGCCCG CCATCTTCCG ATAGTAATAC CAACTCCCGA GCAATTAAAA GAATTTGAAC TTATCTTTGA CCGAGCTAAG AGAGTTCAGG AAGAAAAATT TTCTGGGAAA ATAACTGAAA AGGAAGTCGA GGAAAGATTG GAAGAAATCC AGAAAGAACT TGACGAAAAA GTATTAAAAT TGTATGGCTT GGAATGA
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Protein sequence | MNDKQAKELV RDTFESEFKR EKFDKFITEL LKKNFDRSKA LPKRSGNQAV PEKYRDFITA WERLGRYKDA DKIIDVLIVY LKKGQSLYRS RVAQRNFVAD YLRGTIGTKS IKDAALVAFV SPDEEDWRFS FVKLEYKKED GKVKEVPSPA KRWSFLVGKN EKSHTAQSRF LELLKSDKNP SLEEIQKAFD IETITKEFFK EYRDLFIKTK LELDKIVKEN PAVKKEFEDK NISTVSFAKK LLGQIVFLYF LQKKGWFGVE KGKDFGTGPR DFIRRLFNGE YISYKNFYNE VLEPLFYEAL RVDRSFNDHY YDKLNCKIPF LNGGLFDPPN DFNWVDIDLL IPNELFSNEA ENGILDVFDR YNFTVNEEEP LEKEVALDPE LLGKIYEKLN AIREDNFDEY LKALKSSTKE EDKFNREYGV YYTPREIVHY MCSESLIYYL ESQLDGKVSR EDLEVFVNFA DLLIENEKVA QKKVENGNKE TKYEYKIPKS IIQNAQEIDK LLDGLKICDP AVGSGAFPVG MLHEIVKLRQ LLSVYTKNNL NTYDLKRHTI ENSIYGVDID PGAIEVCKLR FWLSLVVDEE SFKDIKPLPN LDYKIVRGNS LIGFPPNDLL SKENKISELE SKYFSETHPD RKREIKKELD ALILKKLENS EGVFGYKADF DFRSFFPQVF IEGGFDIVIG NPPYVSTKGV DEKFKKVLEK IYGFSDDLYN HFYFKGIEIL SENGILAFIS SKTFWTIQTK KNLRKLILDN KLLQLVDTAN PFESAMVDTC ITIVQKTKAN DYEILFIDAR NGLDKKEVYK VKDEIYKNVA NNVFFMPSEF NLKIYEKLGK KVKELLDRWW DKISSSKNIE KYKKELEAYR NSLKVGDITL LGLITEGGQG LATGNNGKYV GVLEGTKQAE KVRKERPEKL WNFIKTQNPK EFSNLKSKKD VEDYLNSLSE KEIRKLFDGL KEKYGRDIFG QGWLYRIVSK DEIADVDSLS DDEKLNGIDG DKTFVPYDKG DKDGNRWWAP TPYYIDWSRE NVRFLKENSG KKGEGMPVVR NQQFYFKEGF CWTDVNSTYL KSRIKEKGVY DVLSMSLFTK CNIPDYYYVC MINSKFISEY VDDFVNSTSH FQINDARHLP IVIPTPEQLK EFELIFDRAK RVQEEKFSGK ITEKEVEERL EEIQKELDEK VLKLYGLE
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